Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0769 ATGAAGACTTGTGATGAATGGAAACCTTTTCTAGTAATGATGGCAATTGACTTTGGCCTCACCTTAGTCAACATTCTTCTCAAGAAAATCCTTGAACAAGGAATGAACCATTTAGTTTTCATTACATACCGTCTCTCAGTTTCTTCAATATTTTTATTCCCAATCAGCTACTTTTGGGAAAGAAATGAAAGACCACACCTCACATATAGAATTTGTTGCTACCTCTTCTTCAGTGCCATTGTTGGGGCATCTGTGATACAATACTTCTTCCTTCTTGGGATCCAATACACCTCTGCTACCTTTGCTTGTGCCTTTCTCAACATGGTGCCTGTAATCACATTCATTGTTGCATTACCATTTGGATTAGAGACTGTGAACATTAAATTAAACAGTGGAAAAGCAAAGATTGTTGGTACATTTGTGTGCATTGGAGGGGCTTTGTTGTTGACACTTTACAAAGGAAAGCCCTTGTTTAATTATTCTCAATCTTACTATGAGTCTACAGCTCCAGCTTCTCCTGTTACTAGATCAACAGGGAAATGGACAATTGGTGTAATAGCTTTGATTGTGGGAACCCTTTTTCTGTCATCATGGTATATTTTACAATCAATGATAGTGAAGAAATACCCATGCAAGTATTCTAGCACAGCCATCATGACCTTCTTTGGAGCTATTCAATCAGCTATCATTTGCTTATCCACTAGCAGGAACTTCTCCATATGGGTTGTTAAAGAAAAGATACAAATCCTCACTGTTCTGTATGCAGGTGTGGTTGGATCAGGTTTGTGCTTTGTAGGAACATCATGGTGTGTGAAGAAAAGGGGTCCTGTCTTCACAGCAGCATTTAGCCCTCTTGTTCAGATAATGTCAGCCATGATTGAGGTCCCACTCATGCATGAGCAACTCCATCTTGGAAGTGTGATGGGATCAATCATGGTGATGATGGGATTATACCTTCTTCTATGGGGTAAGAAGCAAGGAGATGCAGAATCAAGTGATCAAATTATTCAAAGGAGTTGA 1020 0.3931 MKTCDEWKPFLVMMAIDFGLTLVNILLKKILEQGMNHLVFITYRLSVSSIFLFPISYFWERNERPHLTYRICCYLFFSAIVGASVIQYFFLLGIQYTSATFACAFLNMVPVITFIVALPFGLETVNIKLNSGKAKIVGTFVCIGGALLLTLYKGKPLFNYSQSYYESTAPASPVTRSTGKWTIGVIALIVGTLFLSSWYILQSMIVKKYPCKYSSTAIMTFFGAIQSAIICLSTSRNFSIWVVKEKIQILTVLYAGVVGSGLCFVGTSWCVKKRGPVFTAAFSPLVQIMSAMIEVPLMHEQLHLGSVMGSIMVMMGLYLLLWGKKQGDAESSDQIIQRS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0769 339 PANTHER WAT1-RELATED PROTEIN 9 333 IPR030184 GO:0016021|GO:0022857
Lal19g0769 339 PANTHER WAT1-RELATED PROTEIN 9 333 - -
Lal19g0769 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Lal19g0769 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Lal19g0769 339 Pfam EamA-like transporter family 24 150 IPR000620 GO:0016020|GO:0016021
Lal19g0769 339 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0769 Lal-Chr19 11754233 11756851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0769 7 255 Nodulin-like Gene Family AT3G30340 49.398 4.75e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0769 - - gmx:100803670 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g0692 7 13903344 13906421 Lal19g0769 19 11754233 11756851 LSH
Lal19g0769 19 11754233 11756851 Lal3g0407 3 2820666 2823698 PCT
Lal3g0407 3 2820666 2823698 Lal19g0769 19 11754233 11756851 PCT