Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0761 ATGTCAGAAGGGTATGATGAGATTCAAGACAATGAGAGGAATGAGGAACAAGGTGAGGATACTTCATTGAGGTATTCACATAAATCTTCATCCTTTGACTTGAATGAAGAAGCTAATAGTGAAGATAACAATGATAATGATGAAGCATGTAATGAAGTCAAAGGTGATGAGGAAAATGATGAGAAAGTAAAGGAGAATGAAGGGACTTCAAGTAATAATAGAAGTATAACAAGTTCAAAAGAAATAGGAAATGAAAGAAGAAGTGGTGTGAGACAATATGTTAGATCAAAGATGCCTAGACTTCGATGGACTCATGATCTTCATCTCTCCTTTGTGCATGCAATTGAAAGGCTTGGTGGTCAAGAGAGGGCTACTCCCAAATTGGTCCTTCAGCTAATGAATGTGAGAGGTCTCAGTATTGCTCATGTTAAGAGTCATTTGCAGATGTACAGAAGCAAGAAACTTGATGAGACTGGGCAAGTATTAAGTCAATACAGATCAGCCCATGATCACTTAGGTCGTATTTGCCATGTATCTCATCAATCCATGAGTCCTCATCAACATTTCAAAATGGGAAATGGTGGAATCATTCTAGCAAGTCCTTCCAAAGAGCATAGCAATTTCCAGAGTCTCTTGCAGCCATCAATCTCCATATCACATTCACATTCAAAGGCCACTAATTCAAGGCACCAGCAATGGCAATCTTTTAGAACACCAAATTACATAAGCAACGAAGTTATCCCCTCAACAAGCTTACAAACTCAACGAAGATCAATAGCTTCAAACCAAACTCAACTAATCGACACAGGAATCAGAATTGCACCCATGAGACCAAGTCAATTTCTTGAAGAGAAAAGGTGGCCTCCATTACAAATTATGAACAACAATCATGAGTGGAAGAAAATGTTACCTACCAATATTACTGCTAATACTATGTCACAATCTGCTGTACAACAATCTGATCTTTTGAGCTTTGGAAATAACACAAGATTAATCAAACAACATCTATCAAACTCGGATGAGCCTTTCAATTATTCCACTAGCTTAAAGCTTGGATTTGATCCCCCATTTCGGATTAAGTTGAATCAAAAAAAGTTGCAGAATGATAAGCAATGTGTGCCAGATTTGCAACTAGGTTTGAGTCAGAAAGATGGCAAAGCTGATCATTGCGGAGGAACCCAAGAAATCAGCACTAAACTTTCACTTTCTTAG 1212 0.3795 MSEGYDEIQDNERNEEQGEDTSLRYSHKSSSFDLNEEANSEDNNDNDEACNEVKGDEENDEKVKENEGTSSNNRSITSSKEIGNERRSGVRQYVRSKMPRLRWTHDLHLSFVHAIERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDETGQVLSQYRSAHDHLGRICHVSHQSMSPHQHFKMGNGGIILASPSKEHSNFQSLLQPSISISHSHSKATNSRHQQWQSFRTPNYISNEVIPSTSLQTQRRSIASNQTQLIDTGIRIAPMRPSQFLEEKRWPPLQIMNNNHEWKKMLPTNITANTMSQSAVQQSDLLSFGNNTRLIKQHLSNSDEPFNYSTSLKLGFDPPFRIKLNQKKLQNDKQCVPDLQLGLSQKDGKADHCGGTQEISTKLSLS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0761 403 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Lal19g0761 403 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 403 - -
Lal19g0761 403 Pfam Myb-like DNA-binding domain 101 151 IPR001005 -
Lal19g0761 403 MobiDBLite consensus disorder prediction 47 68 - -
Lal19g0761 403 MobiDBLite consensus disorder prediction 1 91 - -
Lal19g0761 403 Gene3D - 98 155 - -
Lal19g0761 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 155 IPR017930 -
Lal19g0761 403 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 154 IPR006447 GO:0003677
Lal19g0761 403 MobiDBLite consensus disorder prediction 381 403 - -
Lal19g0761 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 403 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0761 Lal-Chr19 11684438 11694547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0761 90 167 G2-like Transcription Factor Family AT2G42660 69.880 4.56e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal19g0761 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0761 - - gmx:100808625 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0761 19 11684438 11694547 Lal19g0761 19 11684438 11694547 ECH
Lal7g0686 7 13842243 13847516 Lal19g0761 19 11684438 11694547 ECH
Lal7g0686 7 13842243 13847516 Lal19g0761 19 11684438 11694547 LSH