Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0748 ATGGCTTCCACTAAAGAACGTGAAACCTTCGTCTACACCGCCAAGCTCGCTGAACAAGCCGAGCGCTATGAAGAAATGGTGGAAGCTATGAAGAATGTGGCGAAGCTAAATGTTGAATTGACTGTGGAGGAGAGGAACCTTCTATCTGTTGGGTACAAGAATGTGGTGGGTGCTCGTAGAGCATCATGGAGGATCCTTTCTTCCATTGAGCAAAAGGAAGAAAGTAAAGGAAATGATCTGAATGTGAAGAGAATAAGGGAGTATAGGCAAAAAGTGGAGTCTGAATTGGACAAAATCTGTAGTGATATCATGATTGTTATTGATGAGCACCTTATTCCATCTGGTCCTGGTGGTGAACCTAGTGTCTTTTTCTATAAAATGAAAGGGGACTATTATCGGTATCTGGCAGAATTCAAGTCCGGTGATGACAGAAAAGAGGCTGCTGATCAGTCCATGAAAGCATACCAGCATTGCTATCCTTTGTTTGTTCTATCCTTTTCCTTATTTCGGGGAGAGGAAAATGGGGAGCGGAGACGCTTTAGGGTCATGTTTATATTTCAGACAGCTTTCACTACAGCAGAGGCTGAGTTACCTTCCACGCATCCCATCAGATTGGGTTTGGCTTTAAACTTCTCCGTCTTCTATTATGAAATTTTGAACTCTCCTGAAAGAGCGTGTCACCTTGCTAAGCAGGCATTTGATGAAGCAATCTCTGAGTTGGATAGTCTGAGTGAGGAGTCTTACAAAGACAGCACACTAATTATGCAGCTTCTGAGGGACAACCTAACCTTGTGGACTTCTGACATCCCTGAAGATGGAGGCATTTCTTCACATTTTATATTTCCTGCTATGGTTATTTTTGTTACTTTTATGGTCCTGAAAACTCCAACTCCAGTATCCCTCATCTCCCTGGTTAATGAATTGCCTCATTTTTCACAGCCGAGGAACAAAAAGTGGAGTCTGCCAAAGCCGCCGGAGGTGATGCAGAGTGAGGTGAAGCAGATATTGACTCATGACTAA 1020 0.4324 MASTKERETFVYTAKLAEQAERYEEMVEAMKNVAKLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEESKGNDLNVKRIREYRQKVESELDKICSDIMIVIDEHLIPSGPGGEPSVFFYKMKGDYYRYLAEFKSGDDRKEAADQSMKAYQHCYPLFVLSFSLFRGEENGERRRFRVMFIFQTAFTTAEAELPSTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGISSHFIFPAMVIFVTFMVLKTPTPVSLISLVNELPHFSQPRNKKWSLPKPPEVMQSEVKQILTHD 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0748 339 Gene3D - 1 275 IPR036815 -
Lal19g0748 339 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lal19g0748 339 SMART 1433_4 7 279 IPR023410 -
Lal19g0748 339 Coils Coil 226 246 - -
Lal19g0748 339 SUPERFAMILY 14-3-3 protein 6 170 IPR036815 -
Lal19g0748 339 Pfam 14-3-3 protein 14 159 IPR023410 -
Lal19g0748 339 Pfam 14-3-3 protein 185 266 IPR023410 -
Lal19g0748 339 ProSitePatterns 14-3-3 proteins signature 2. 248 267 IPR023409 -
Lal19g0748 339 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lal19g0748 339 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lal19g0748 339 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lal19g0748 339 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 157 - -
Lal19g0748 339 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 185 273 - -
Lal19g0748 339 SUPERFAMILY 14-3-3 protein 183 273 IPR036815 -
Lal19g0748 339 Coils Coil 13 46 - -
Lal19g0748 339 PANTHER 14-3-3 PROTEIN 4 157 IPR000308 -
Lal19g0748 339 PANTHER 14-3-3 PROTEIN 185 273 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0748 Lal-Chr19 11503028 11506761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0748 1 278 14-3-3 family AT2G42590 71.942 1.42e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0748 K06630 - gmx:100807980 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0748 19 11503028 11506761 Lal19g0748 19 11503028 11506761 ECH
Lal7g0684 7 13822635 13827004 Lal19g0748 19 11503028 11506761 ECH
Lal14g1199 14 13984250 13989198 Lal19g0748 19 11503028 11506761 LSH
Lal7g0684 7 13822635 13827004 Lal19g0748 19 11503028 11506761 LSH