Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0627 ATGGCAAGTTATGAAGCCCTCCAAAGGTCCCAAAGGAACCTTATGGGAGAAGACCTTAGCCCTTTAAGTAGCAAAGAGCTCGAGTCACTTGAAAGACAACTAGATTCTTCCTTGAAGCAAATCAGATCAACAAGGGTACTCAAGTTTCCAATTCCGATGGGCCCAAATATGTATGATGCGGTTGTGGCGGTCAAAGCAACCGCAATATTGCAGACGCATCAATGTAGTCCATAA 234 0.4444 MASYEALQRSQRNLMGEDLSPLSSKELESLERQLDSSLKQIRSTRVLKFPIPMGPNMYDAVVAVKATAILQTHQCSP 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0627 77 Pfam K-box region 3 45 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal19g0627 77 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG 2 46 - -
Lal19g0627 77 Coils Coil 27 47 - -
Lal19g0627 77 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0627 Lal-Chr19 9048288 9048891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0627 4 46 MADS-box Gene Family AT1G24260 81.395 3.52e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0627 - - gmx:100805078 72.0182