Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0602 ATGAGAAGGTGTTGGTTTTTTGAGGTGTTGGCTGTGGTAGGGTGTGCATGCTTGGTTGGTAATGTTGTAGGGTACCCTACGGAGGATCTGGTGGAGAATCTACCTGGGCAACCCCATGTTGGGTTCAAACAGTTTGCTGGGTATGTTGACATAGATGTCAAAACTGGGAAGAGTTTGTTTTACTATTTTGTCGAAGCTGACCATGACCCTCAAAACACTGCCCTTACCCTTTGGCTCAATGGAGGCTTGGTCAAATCTTCGGCCGACTTGGTCATGGCATTGTTAGAAGCTAAGTCAGTCCCACCTGGCTTGGTCAGAGCATGGCAAGAAGCTTCGGTCATGCTTGACTTGTGCTTGGCTTTAGTTGGTCCTGGATGTTCCTCCATTGGAGGAGGTGCGTTTACTGAATTGGGCCCCTTTTATCCTAGAGGTGATGGACGTGGTCTACGAATAAATTCAAGGTCTTGGAATAAAGCATCCAACCTCCTCTTTATTGAGTCTCCTGCTGGTGTTGGTTGGTCATACTCAAATACCACGTCAGATTACAACACTGGAGATGCGTCCACCGCCAATGATTTGGTTGTGTTCTTTCTAAAATGGTACGAGAAGTTTCCATCCTACAAATCAAGGGAGCTGTTCCTCACTGGAGAAAGTTATGCAGGACATTATATACCACAGTTAGCTGATGCGCTTCTAAACTTTAATGCCAATTCAACTGATTTCAAATTCAATATCAAAGGAGTGGCTATTGGAAACCCACTTCTGAAACTTGGTAGTTTTAGACAATCAAGATATGAATACTACTGGTCACATGGACTGATCTCTGATGAACTTGGCCTAACTATAAAGAAAGAATGTAATTTTGATGATGATGTCTCTGGAAGTATTAACAATGTATCTACTTCATGCGAAAATGCCATGTCTGAAGCAAGTGATAGTGTTGGCCAATATATAAATGATTATGATATCATTCTTGATGTTTGTTATCCAGCAATTGCTGAACAAGAACTGAGATTGCATAAATCGATTACTAAATTGAGTATAGGTGTAGATGTATGTATGTCTCGTGAAAGAAGCTTTTACTTCAACCTCCCTGAAGTTCAGAAGGCTCTTCATGCAAATCGTACAAATCTTCCTTATAAGTGGACTACGTGTAGTGACGTTTTAAATTATAGTGAAACAGATATTAGCATCAATATCATTCCGATTCTGAAAAGGATAGTTCAAAACCACATTAAAGTGTGGATTTTCAGTGGAGACCAAGATTCTGTTGTGCCGTTAACGGGTACTCGTACACTCATTCGTGAACTAGCTCAGGAACTCAACTTCAACATTACAGTTCCTTACGGAGCTTGGTTCCACGGTGGACAGGTTGGAGGATGGGCAATAGAGTATGGAAATATATTGACTTTTGCTACTGTAAGAGGAGCTTCTCATATGGTACCTTATGCACAACCTTCTAGAGCACTCCATCTATTCAGTGATTTTGTTCTTGGAAGGAGATTGCCAAATGCAACTCTTCCTTCAATTGACTAA 1536 0.4134 MRRCWFFEVLAVVGCACLVGNVVGYPTEDLVENLPGQPHVGFKQFAGYVDIDVKTGKSLFYYFVEADHDPQNTALTLWLNGGLVKSSADLVMALLEAKSVPPGLVRAWQEASVMLDLCLALVGPGCSSIGGGAFTELGPFYPRGDGRGLRINSRSWNKASNLLFIESPAGVGWSYSNTTSDYNTGDASTANDLVVFFLKWYEKFPSYKSRELFLTGESYAGHYIPQLADALLNFNANSTDFKFNIKGVAIGNPLLKLGSFRQSRYEYYWSHGLISDELGLTIKKECNFDDDVSGSINNVSTSCENAMSEASDSVGQYINDYDIILDVCYPAIAEQELRLHKSITKLSIGVDVCMSRERSFYFNLPEVQKALHANRTNLPYKWTTCSDVLNYSETDISINIIPILKRIVQNHIKVWIFSGDQDSVVPLTGTRTLIRELAQELNFNITVPYGAWFHGGQVGGWAIEYGNILTFATVRGASHMVPYAQPSRALHLFSDFVLGRRLPNATLPSID 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0602 511 ProSitePatterns Serine carboxypeptidases, histidine active site. 469 486 IPR033124 GO:0004185
Lal19g0602 511 SUPERFAMILY alpha/beta-Hydrolases 123 502 IPR029058 -
Lal19g0602 511 Gene3D alpha/beta hydrolase 26 329 IPR029058 -
Lal19g0602 511 Gene3D - 353 389 - -
Lal19g0602 511 PANTHER CARBOXYPEPTIDASE 6 87 - -
Lal19g0602 511 PANTHER CARBOXYPEPTIDASE 122 506 - -
Lal19g0602 511 Gene3D - 400 499 - -
Lal19g0602 511 Pfam Serine carboxypeptidase 36 82 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 Pfam Serine carboxypeptidase 123 498 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 122 506 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 87 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 164 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 175 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 200 225 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Lal19g0602 511 SUPERFAMILY alpha/beta-Hydrolases 28 82 IPR029058 -
Lal19g0602 511 ProSitePatterns Serine carboxypeptidases, serine active site. 214 221 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0602 Lal-Chr19 8704397 8709681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0602 359 502 Calmodulin-binding Proteins AT2G22960 28.472 1.77e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0602 K16297 - gmx:100815723 741.88