Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0569 ATGTATGAATTTCACTTTCCCTCTTCTAAAGTCATATATGGCTCATCGTGTTCCTTTAATTTCCACCATTTTCGTCTTTCTTTTGCTCCTGAAATGGGACCTACAATGATGGCAGAAGCTAGGACTTGTAAGTCTGAGAGCCAGAAGTTTAAGGGATCATGTTATAGCGATACCAATTGTGCTACTATTTGTGAAGGAGAGGGTTTCACTAGAGGGAAATGCCATGGCTTCTTTAGCAAATGCTGGTGTAAAAGACTTAGATTGATTACATAG 273 0.3919 MYEFHFPSSKVIYGSSCSFNFHHFRLSFAPEMGPTMMAEARTCKSESQKFKGSCYSDTNCATICEGEGFTRGKCHGFFSKCWCKRLRLIT 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0569 90 CDD Knot1 52 83 IPR003614 GO:0006952
Lal19g0569 90 Gene3D - 40 86 IPR036574 -
Lal19g0569 90 PANTHER DEFENSIN-LIKE PROTEIN 1 26 85 - -
Lal19g0569 90 Pfam Gamma-thionin family 41 85 - -
Lal19g0569 90 ProSitePatterns Gamma-thionins family signature. 41 64 IPR008176 GO:0006952
Lal19g0569 90 SMART gth_4 42 87 IPR003614 GO:0006952
Lal19g0569 90 PANTHER DEFENSIN 26 85 - -
Lal19g0569 90 PRINTS Purothionin signature 42 57 IPR008176 GO:0006952
Lal19g0569 90 PRINTS Purothionin signature 72 86 IPR008176 GO:0006952
Lal19g0569 90 SUPERFAMILY Scorpion toxin-like 41 85 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0569 Lal-Chr19 8113722 8114549 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0569 29 85 Plant Defensins Gene Families AT2G02120 56.140 2.59e-17 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0569 - - gmx:100798577 85.5001