Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0561 ATGACTCCTAGTGTACCTTCAATTTCCACCATTTTCGTCATTCTTATGCTTCTGGTTGCTACTGAAATGATGCCTAGAATGGTGGCAGAAGCAAGGAAGTGTAAGTCTGAAAGCCAAAAGTTCCTTGGAATATGTCAAAGTAATACCAATTGTGCTAGTATTTGCCAAAGCGAGGGCTTCCCCACAGGGAAATGTCATGGCGTAGTCTTATTTAAAAAATGTTTATGTAAAAAATCTTGCTTAGATTGA 249 0.3855 MTPSVPSISTIFVILMLLVATEMMPRMVAEARKCKSESQKFLGICQSNTNCASICQSEGFPTGKCHGVVLFKKCLCKKSCLD 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0561 82 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Lal19g0561 82 CDD Knot1 43 76 IPR003614 GO:0006952
Lal19g0561 82 SMART gth_4 33 80 IPR003614 GO:0006952
Lal19g0561 82 Gene3D - 27 82 IPR036574 -
Lal19g0561 82 PANTHER DEFENSIN-LIKE PROTEIN 1 2 80 - -
Lal19g0561 82 PANTHER DEFENSIN-LIKE PROTEIN CAL1 2 80 - -
Lal19g0561 82 Pfam Gamma-thionin family 32 80 - -
Lal19g0561 82 SUPERFAMILY Scorpion toxin-like 31 80 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0561 Lal-Chr19 8005264 8005863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0561 1 80 Plant Defensins Gene Families AT2G02120 43.750 3.29e-19 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0561 - - gsj:114420878 90.1225