Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0558 ATGGCTCATCGTGTTCCTTTAATTTCCACCATTTTAAAGAAATGGGACCTGATGGCAGAAGCAAGGACTTGTAAGTTTAAGAGCCAGAGGTATAGGGGATCATGTCATAGAAATACCAATTGTGCTACTATTTGCGTAGGAGAGGGTTTCACTGTAGGGAAATGCCATGGCTTCTTATTCAAATGCTGGTGTAAAAGCCATGCTTAG 207 0.4155 MAHRVPLISTILKKWDLMAEARTCKFKSQRYRGSCHRNTNCATICVGEGFTVGKCHGFLFKCWCKSHA 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0558 68 Gene3D - 17 68 IPR036574 -
Lal19g0558 68 PANTHER DEFENSIN-LIKE PROTEIN 1 18 66 - -
Lal19g0558 68 PANTHER DEFENSIN-LIKE PROTEIN P322 18 66 - -
Lal19g0558 68 Pfam Gamma-thionin family 22 66 - -
Lal19g0558 68 CDD Knot1 33 64 IPR003614 GO:0006952
Lal19g0558 68 SUPERFAMILY Scorpion toxin-like 22 66 IPR036574 -
Lal19g0558 68 ProSitePatterns Gamma-thionins family signature. 22 45 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0558 Lal-Chr19 7918252 7918852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0558 16 67 Plant Defensins Gene Families AT2G02130 48.077 2.07e-12 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0558 - - cam:101490338 70.0922