Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0556 ATGGCTCCTGGTGTTCCATTAATTTCCACCATTTTCGTCTTTCTTTTGCTCTTGGTTGTCACTGAAATGGGACCTACAATGATGGAAGAAGCAAGAACTTGTAAGTCTAAGAGCCAGAGGTATAAGGGATCATGTTATAGCGATAACAATTGTGCTATTATTTGTGAAGGAGAGGGTTTCACTGGAGGGAAATGTCATGGCTTCTTTTGCAAATGTTGGTGTAAAAGACCATGCTTGGATTGA 243 0.4033 MAPGVPLISTIFVFLLLLVVTEMGPTMMEEARTCKSKSQRYKGSCYSDNNCAIICEGEGFTGGKCHGFFCKCWCKRPCLD 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0556 80 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Lal19g0556 80 PANTHER DEFENSIN-LIKE PROTEIN P322 4 78 - -
Lal19g0556 80 PANTHER DEFENSIN-LIKE PROTEIN 1 4 78 - -
Lal19g0556 80 Gene3D - 27 80 IPR036574 -
Lal19g0556 80 SMART gth_4 33 78 IPR003614 GO:0006952
Lal19g0556 80 CDD Knot1 43 74 IPR003614 GO:0006952
Lal19g0556 80 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Lal19g0556 80 PRINTS Purothionin signature 49 62 IPR008176 GO:0006952
Lal19g0556 80 Pfam Gamma-thionin family 32 78 - -
Lal19g0556 80 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0556 Lal-Chr19 7909378 7909993 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0556 1 78 Plant Defensins Gene Families AT2G02100 47.436 1.33e-22 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0556 - - gsj:114420878 104.375