Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0499 ATGAATAAATATGGTGATAATTTGAATATGCGTCGCCGTGCGAATCATTTATTAAGAAAAATAAATAAACTTAACACAAAAGCAGAAAAAGAAGTAATATTAACTTGGTCGAGTACATCTATCATTATACCCACAATGATTGGCCATACCATTGCTATCCACAATGGAAAAGAACATTTACCTATGTATATAACAGATCGTATGGTAGGCCATAAATTGGGAGAATTTTCACCCACTCTAATCTTCCCAAGGACATTCGAAAAATGA 267 0.3296 MNKYGDNLNMRRRANHLLRKINKLNTKAEKEVILTWSSTSIIIPTMIGHTIAIHNGKEHLPMYITDRMVGHKLGEFSPTLIFPRTFEK 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0499 88 ProSitePatterns Ribosomal protein S19 signature. 55 79 IPR020934 GO:0003723
Lal19g0499 88 Gene3D 30s Ribosomal Protein S19; Chain A 10 88 IPR023575 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 Pfam Ribosomal protein S19 12 80 IPR002222 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 Coils Coil 7 31 - -
Lal19g0499 88 Hamap 30S ribosomal protein S19 [rpsS]. 10 86 IPR002222 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 PANTHER 30S RIBOSOMAL PROTEIN S19, CHLOROPLASTIC 14 82 - -
Lal19g0499 88 TIGRFAM rpsS_bact: ribosomal protein uS19 15 82 IPR005732 GO:0003735|GO:0006412|GO:0015935
Lal19g0499 88 PRINTS Ribosomal protein S19 family signature 35 54 IPR002222 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 PRINTS Ribosomal protein S19 family signature 55 67 IPR002222 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 PRINTS Ribosomal protein S19 family signature 67 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 14 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Lal19g0499 88 SUPERFAMILY Ribosomal protein S19 14 82 IPR023575 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0499 Lal-Chr19 6533023 6533390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0499 27 80 Cytoplasmic Ribosomal Protein Gene Family AT5G63070 42.593 8.75e-09 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0499 K02965 - fve:10251561 131.724