Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0471 ATGGACAAACCCCATAATTTTCTTCGTAGTCTTATAAATCACTTCAAAATTGGTTCCACTGAAGAGCAAAACAATGAAGGTGACTTACAAAGAATGGCTTCACAGGAACAAAAGATATTTGCCTATGAAACCTTGGTTGCTGCCACCAAGAACTTCAATCTAATTAATAAGTTAGGTGAGGGTGGTTTTGGACCTGTCTACAAGGGGAAACTGAATGATGGGAGAGAGATTGCAGTGAAGAAGTTATCACATACCTCAAATCAAGGGAAGAAAGAGTTCAAAAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCACCGGAATGTGAAATCTTAG 333 0.3994 MDKPHNFLRSLINHFKIGSTEEQNNEGDLQRMASQEQKIFAYETLVAATKNFNLINKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFKNEAKLLARVQHRNVKS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0471 110 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 108 - -
Lal19g0471 110 ProSiteProfiles Protein kinase domain profile. 52 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0471 110 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Lal19g0471 110 SUPERFAMILY Protein kinase-like (PK-like) 30 108 IPR011009 -
Lal19g0471 110 Pfam Protein kinase domain 53 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0471 110 PANTHER RECEPTOR-LIKE KINASE 3 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0471 Lal-Chr19 5890536 5892712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0471 32 108 Receptor kinase-like Gene Family AT4G23190 50.649 3.82e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal19g0471 Pkinase 4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0471 - - gmx:100795769 180.644