Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0438 ATGTGTTTTACCAACAACCGGGAAGTGAAAATATATCAGAAGTCGGTCTGGCAGATTTTTGAGATGGAAGAAGAAATGAACACGAATAATGAAACTCACTGTCAGGCAGAGGGTTTACATGAATTTAATGGTAGTGAAGATGAAAATGTGAATGAAGTAGAGGAGTTAAATTTTGAAGAGATAAATTTTCAATTATTAAATGAAGATGATGTGAAGAAATATAGGTTTTTAAACAATGATATCGCTTACAAATTTTATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACTCGGCGAAACAAGGATGGTGAAATTATATGGCAATCATTTTTTTGTGATAGGGAAGGATTTAGAGATAAAAAAATGAATTGGTTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAG 432 0.331 MCFTNNREVKIYQKSVWQIFEMEEEMNTNNETHCQAEGLHEFNGSEDENVNEVEELNFEEINFQLLNEDDVKKYRFLNNDIAYKFYKMYGMKKGFGIRKYHTRRNKDGEIIWQSFFCDREGFRDKKMNWFGRGRREKRLDVVV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0438 143 Pfam FAR1 DNA-binding domain 84 129 IPR004330 -
Lal19g0438 143 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 128 - -
Lal19g0438 143 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0438 Lal-Chr19 5059054 5060168 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal19g0438 FAR1 1.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0438 - K17604 lang:109327968 121.324