Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0415 ATGACTTCTTCACTAAACCAAGAACCATGGCTTCTTGAGGGTGACTTTAATCTCAAGGGATTGAGCAGAGAAATGAGACATGGCAGAAAAACGGCACATAACATGTCATCCTCGTCTTTGCGCAAGAAATCTGACCTCACTCTTGTCTCTAAGGTTAACTCTAGGTTCCTTAGAAACTTGTTGGGTAACCTTCAAGAGGTTATTCTTGGAACCAAGCTTTCTATTCTGTTCCTTGCTATTCCACTTGCCATCATTGCTGAGTGCTATGGCTTTGCACGACCTTGGGTTTTTGCTTTGAGCTTACTTGGGCTTACACCACTTGCTGAACGAGTCAGCTTCCTCACAGAACAAGTTGCTTGTTACACAGGTCCCACAGTTGGAGGACTTTTGAATGCGACGTGTGGGAATATCACTGAACTCATCATAGCAATATTTGCACTTAGGGAAAATAAAATCGCTGTGGTCAAATATTCTCTCCTGGGTTCTATCCTTTCAAACCTTCTGCTTGTTCTTGGTACCTCTCTATTCTGCGGCGGCATTGTGAACCTCCGACAGGAACAAAAGTTTGACAGAAGACAGGGAGATGCGAACTCGCTTATGCTGCTTCTTGGATTGTTGTGCTACTTTCTACCTATGCTGTTTAAATATGGTGCTGCCTCTCCCACAGCAGACCCAGCTCTAGAGTTGTCAAGAGCTGCAAGTATTGTGATGCTGATTGCATATTTGGCTTACCTTATCTTCCAATTGTGGACTCACCGGCAATTATTTGAAGCCCAAGTTGATGATGATGAGGAGGAGGGTAACAATGCATCAGAAGAAGCAGTGATAGGATTTTGGAGTGGGTTTGCTTGGCTGGTTGGGATGACTGTATTAATTGCTTTGTTGTCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGATTCATGGGGTCTGTCTGTCAGCTTCATCAGCATAATCTTGCTACCGATAGTCGGCAATGCAGCTGAACACGCGGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATAACTTTAGGTGTTGCTCTGGGTTCTGCTACTCAAATTGGCATTTTTGTGGTTCCCCTTTGTACAATTGTTGCTTGGATTATGGGCATTAAAATGGACCTCAACTTCAACCTTCTAGAGACAGGTTCTCTTGCTTTAGCAATAATAACCACAGCCTTCACATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTATTCTCCTTCTCTGCTACGTCGTCATTGGGGTCTGTTTTTTCATCCAAAGAACACCTTCGAATCAAGTTGCTGCCACTAACACGATGCTTAAATCAGCAATTGATATGGTGTCAAGTGCTTAA 1353 0.4339 MTSSLNQEPWLLEGDFNLKGLSREMRHGRKTAHNMSSSSLRKKSDLTLVSKVNSRFLRNLLGNLQEVILGTKLSILFLAIPLAIIAECYGFARPWVFALSLLGLTPLAERVSFLTEQVACYTGPTVGGLLNATCGNITELIIAIFALRENKIAVVKYSLLGSILSNLLLVLGTSLFCGGIVNLRQEQKFDRRQGDANSLMLLLGLLCYFLPMLFKYGAASPTADPALELSRAASIVMLIAYLAYLIFQLWTHRQLFEAQVDDDEEEGNNASEEAVIGFWSGFAWLVGMTVLIALLSEYVVETIEDASDSWGLSVSFISIILLPIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQIGIFVVPLCTIVAWIMGIKMDLNFNLLETGSLALAIITTAFTLQDGTSHYMKGLILLLCYVVIGVCFFIQRTPSNQVAATNTMLKSAIDMVSSA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0415 450 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 436 - -
Lal19g0415 450 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 436 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lal19g0415 450 TIGRFAM cax: calcium/proton exchanger 77 424 IPR004798 GO:0006816|GO:0015369
Lal19g0415 450 Pfam Sodium/calcium exchanger protein 95 250 IPR004837 GO:0016021|GO:0055085
Lal19g0415 450 Pfam Sodium/calcium exchanger protein 281 421 IPR004837 GO:0016021|GO:0055085
Lal19g0415 450 TIGRFAM caca2: calcium/proton exchanger 59 424 - -
Lal19g0415 450 Gene3D - 124 273 IPR044880 -
Lal19g0415 450 Gene3D - 274 425 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0415 Lal-Chr19 4708727 4715134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0415 8 433 Antiporters AT2G38170 70.345 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0415 K07300 - gmx:100782052 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0415 19 4708727 4715134 Lal19g0415 19 4708727 4715134 ECH