Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0406 ATGGAGGGTCATCATCATCTTCAACATCTCCAACGGCAACAGCAGCATCAACAACAACAGCATCAACATCTTCAGCCTCCACAGAATTTAACTACGACTAGTGTTAACGTGGTTGATGTCACGGATCGATTCCCTCAGTGGAGCATCCAAGAAACGAAAGAGTTCTTAATGATTCGTGCAGATCTGGATCAGACTTTCATGGAGACAAAACGGAACAAGCAGTTGTGGGAAATTATATCTAACGGGATGAAGGAAAAGGGTTACCATCGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCCGCTATAAGGGATGTGAAACAATGGAGCCAGAAGGGTTGAGGCAGCAATTCCCATTTTATAATGAACTTCAGGCAATTTTCACTGCAAGGATGCAAGGAATGCTATGGGCTGAAGTTGACGGTGGTTCGAAGAAGAAAGCGATGTATCTCTCATCTGATGAAGAAGATGATGTAAATGAAGAGATTGAGGAGCAGAAGGGTAGCAGCAGAAAGAAGAAGAAGGCTAAGATAGTTAGTGGGGGAGGAAGTGCTAGTGGTAGCTCTAATAATTTGAACAACTTGAAAGAGATTCTAGATGATTTCATGAGACAACAGAAGCAAATTGAAGCACAATGGATGGAGGCATTTGAGGCAAGGGAGAATGAGAGAAGGTTAAAGGAAATGGAGTGGAGGAAAGCCATGGAAGCATTAGAGAAAGAGAGGATCATGATGGACCAAAGATGGAGAGAAAGAGAAGAACAAAGAAGGATTAGAGATGAAGCTAGGGCTAACAAGAGGGATGCTCTAATCACAGCTCTGCTAAACAAACTAGAAAGAGATGATATGTAG 861 0.4286 MEGHHHLQHLQRQQQHQQQQHQHLQPPQNLTTTSVNVVDVTDRFPQWSIQETKEFLMIRADLDQTFMETKRNKQLWEIISNGMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEPEGLRQQFPFYNELQAIFTARMQGMLWAEVDGGSKKKAMYLSSDEEDDVNEEIEEQKGSSRKKKKAKIVSGGGSASGSSNNLNNLKEILDDFMRQQKQIEAQWMEAFEARENERRLKEMEWRKAMEALEKERIMMDQRWREREEQRRIRDEARANKRDALITALLNKLERDDM 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0406 286 MobiDBLite consensus disorder prediction 1 31 - -
Lal19g0406 286 Pfam Myb/SANT-like DNA-binding domain 46 130 IPR044822 -
Lal19g0406 286 Gene3D - 47 108 - -
Lal19g0406 286 MobiDBLite consensus disorder prediction 154 195 - -
Lal19g0406 286 Coils Coil 195 215 - -
Lal19g0406 286 CDD GT1 45 110 - -
Lal19g0406 286 MobiDBLite consensus disorder prediction 12 31 - -
Lal19g0406 286 ProSiteProfiles Myb-like domain profile. 47 103 IPR001005 -
Lal19g0406 286 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 284 - -
Lal19g0406 286 PANTHER - 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0406 Lal-Chr19 4465911 4467824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0406 42 284 Trihelix Transcription Factor Family AT5G01380 53.558 5.50e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal19g0406 Myb_DNA-bind_4 1.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0406 - - gmx:100794230 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0406 19 4465911 4467824 Lal19g0406 19 4465911 4467824 ECH