Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0327 ATGGGAGGTTGTTGTAGCTGCCATGTTACATTTGGAGGGAGAGTTTATGATATGGAATCTGAGAGTAATGAACATTACAATAAAAATATTGCATATGAAGATGGATATGGTGGGGCCCAGATTATGTTAGGAGAATCCTCTAAGTTTGTATCAAAGTATTGCCAAAAGGGTAGAAAAGGAATAAATCAAGATGCATTGACAGTTTGGGAGGACTTCATGGGAGAACAAGGTATGATCTTTTGTGGTGTGTTTGATGGTCATGGTCCCTTAGGTCACAAGTTTTCACATTGTGTACGTGACAATCTACCTTCAAAGCTCTCTGAAGCAATCAAAATGTCACAACAAAATTCTAGCAGTTCAGGTCAACATAAACAAAACATGTCCTTTGTTTCTTGGAATGAAAGCTTCAATAAGTCCTTCATTGAAATGGATGAAGAACTTGCTATGAAAGTTGACACCGATGGCTTTCGCGGCGGTAGCACCGCAGTTACAGTAATTAAACAGGGAGATCAGTTGATAATCGGAAATTTGGGCGATTCTCGCGCAGTTCTTTGCACGAGAGCAGATGATAATCATTGTGTTCCTGTTCCACTTACTGTTGATTTGAAGCCAGATATTCCAAGTGAAGCTTTAAGAATTGCAAATTGTGGAGGTAGAATTTTTTCTGCTGAGGAAGATCCAGGTGTACAAAGAGTATGGATGCTTGAAGAAGATTGCCCCGGACTAGCTATGTCGAGAGCGTTCGGAGATTTTTGCCTAAAAAACTGTGGCCTCACCTCAGTTCCTGATGTATTTTGTAGAAAACTTAGTAAGCAAGATCAATTTGTGGTTTTGGCCTCGGACGGGGTATGGGATGTGCTAACAAACAATGAAGTAATAAGCATAGTTGCTTCAGCACGAAAGAGGTCGATGGCTGCCAAAATTTTAGTAAAGCATGCTGTTCATGCCTGGAGAATTAAGCATCCTAGTTCCGAGATCGATGATTGTGCAGTCATATGCTTGTTCCTGAATGAATGA 1017 0.4051 MGGCCSCHVTFGGRVYDMESESNEHYNKNIAYEDGYGGAQIMLGESSKFVSKYCQKGRKGINQDALTVWEDFMGEQGMIFCGVFDGHGPLGHKFSHCVRDNLPSKLSEAIKMSQQNSSSSGQHKQNMSFVSWNESFNKSFIEMDEELAMKVDTDGFRGGSTAVTVIKQGDQLIIGNLGDSRAVLCTRADDNHCVPVPLTVDLKPDIPSEALRIANCGGRIFSAEEDPGVQRVWMLEEDCPGLAMSRAFGDFCLKNCGLTSVPDVFCRKLSKQDQFVVLASDGVWDVLTNNEVISIVASARKRSMAAKILVKHAVHAWRIKHPSSEIDDCAVICLFLNE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0327 338 CDD PP2Cc 49 336 IPR001932 -
Lal19g0327 338 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 338 - -
Lal19g0327 338 SMART PP2C_4 40 334 IPR001932 -
Lal19g0327 338 SUPERFAMILY PP2C-like 48 337 IPR036457 -
Lal19g0327 338 PANTHER ALPHABET, ISOFORM E-RELATED 1 338 - -
Lal19g0327 338 Gene3D - 45 337 IPR036457 -
Lal19g0327 338 Pfam Protein phosphatase 2C 77 314 IPR001932 -
Lal19g0327 338 ProSiteProfiles PPM-type phosphatase domain profile. 49 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0327 Lal-Chr19 3518112 3520998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0327 1 337 PP2C-type Phosphatase Gene Family AT5G01700 50.733 1.40e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0327 - - cam:101501265 429.869