Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0277 ATGTGTGGGGATATGATATTAGATTCTGAAGAGAAACTTCACACTTTTTACAACAATTATGCCTATGAATTTGGATTTGGGGTTCGTAAAATTAGCACAAAAACAAAGGGTGAAGTGAAATATTACACACTTGCATGTTCAAGAGGAAGTAAATATGTATGTAAGGCAAATTCTTCTAAGGTAAGATTGTCCACCAAAACAGAGTTCCAAGCAAAAATTTCTGTGATTGTTCATAGTAGTGGAAAGTGTACTATTTCTTCTGTTCATCTATATCATAATCATGCTTTAAGTCCAACAAAGTCTAGATATCAAAGGTCTCATAAGAAAATGGATTCTTATTCAAAAAGAAAACTTGAATTGAATGATTGTGCAGGAATTCCATTAATTTTTTTTTTCCATTCATTGGTAGTTGAAGCTAAAGGGTATGAGAACCTACAATTTGGTGAGAAAGATTGTCGAAATTACATTGCAAAGTTGAGACAATTAAGACTTGGAGTAGGGGATGCTGAAGCACTTCGTAACTACTTCACTCATGCAAGGTCTAGGGCAGCTTATGATTCATTTGGAGATGTTGTGTCATTTGATAGTACTTATTTGACTAATAGGTATAATATGCCGTTTTCTCTTTTGTTGTGGCTTACTGCTGCAGATCAGCTGTCCCCATCCCTGTCTAAACCATATCCCGAACCAATCACAATGCTGCCATATGATTAA 714 0.3501 MCGDMILDSEEKLHTFYNNYAYEFGFGVRKISTKTKGEVKYYTLACSRGSKYVCKANSSKVRLSTKTEFQAKISVIVHSSGKCTISSVHLYHNHALSPTKSRYQRSHKKMDSYSKRKLELNDCAGIPLIFFFHSLVVEAKGYENLQFGEKDCRNYIAKLRQLRLGVGDAEALRNYFTHARSRAAYDSFGDVVSFDSTYLTNRYNMPFSLLLWLTAADQLSPSLSKPYPEPITMLPYD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0277 237 Pfam FAR1 DNA-binding domain 15 97 IPR004330 -
Lal19g0277 237 PANTHER PROTEIN FAR-RED IMPAIRED RESPONSE 1-LIKE 5 208 - -
Lal19g0277 237 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 208 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0277 Lal-Chr19 2801323 2802117 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal19g0277 FAR1 1.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0277 - - ecad:122587955 275.018