Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0266 ATGCCCTTGCCTTTTGAGGAATTTCAAGAGAAGGGAGTTTTGGATTTTTGTTCTTCTGCAGCTTCAGATTCTTTTTCACTCCTTTGGCATCAACAGCCACAAAATTTGAGCATAGACAAAGGGTTTTATTGCTATGTGGGTACTGAGCCTAATTCTGTTCTTGATTCCAGAAGAAGCCCAAACCCTTCTTTATCATCTTCCACAATGTCCTCTTCTGTTGCAGCCACAAATCTCTCAGAGAACCCTCTTCATGCATCATTAGAATCCAGCACAGAAAAATGTGATATGAGAATGGAGGATTGGGAGGGTCAAGATCAGTCTATTATGAGGTTAATCATGGGTGATGTTGAAGACCCTTCTGCAGGATTGAGCAAGCTCTTCCAAACTGGTGGTTGTGGCTATCAAAATGTCGATTTCAATCGAGGTTTTGGTGTTGTAGATGAAGGGTTGAATATGGTAAGTATTATTGATCCTTCTGTGCAAGTGAATTACCATGCCTTTCCATTTGTTGAGAATATAGATTGTTACAGTGCAAAAACTGGTTCCGTGTCTGTCTCGGAATCGATTCCTGTTTCAGCTAACAGTTCTTTGTTGGTTTTGTCATCCCCCGGTGTGTTTAATTCTCAGCAGCAGCAGCTGCAGCAGCAAGGGATTGGTGTTGTCGATGAGAAGCCTCGACTTATCAATCCTCAATTGATGTTAAACCAGAATCAAGCTCGGTTGTCGAATAACCCTTCTTTCTTTGTGCCATTGACATACCCTCAAATGCAAGAGCAGGAAGTTTTCTCGCAGCATCAAGCGGAACGCCCTTTGTCTGACACGGTTGGGCACAATTATCAGGTTCCAAGGTTTCCCCTTTTGGACTGTGGGCAAGAATTATTTGCTCGGAGGCAGCAAAAACAGCTTCCGTTATTTCCTCATCATCATCTGCAACAGCTACAACCATTGGTTGTGCCGTCTGCAAAACAGAAGAAGGTGAATTCCACTGGAGATGATGCAAGCAACCAGCTTCAGCAGAGTATATTTGACCAGCTATACAAAACGGCTGAGTTGATAGAAGCTGGTAATCCGGTACTTGCGCAAGGGATATTGGCGCGGCTCAATCAGCAGCTCTCCCCGGTTGGAAAGCCTTTCCAAAGGGCTACTTTCTACATGAAGGAGGCCTTGCAGTTACTGCTCAATTCGAACATTCACAATTCTATTGCTTTCTCACCAATCAATTTCATATTCAAAATTGGAGCTTACAAGTCATTTTCTGAGATATCACCGGTTCTTCAGTTTGTCAACTTCACTTGTAATCAAGCCCTTGTCGAAGCTCTGGAAAAGTTTGATAGAGTTCACATTATTGATTTTGACATTGGGTTTGGAGAGCAATGGTCTTCTTTTATGCAAGAGCTTGCCTTGAGAAATAACAGCGCAACATCGCTTAAAGTCACGGCTATTGTATCTCCCTCCACTTGCGATAACGACGAGCTCAATTTTATCCGACAAAATTTGAACCAATATGCCAAAGACATTAACATGTTCTTTGAACTCGATGTTTTGAGCATTGAATCATTGAACTCTCCTTCTTGTCAGTTCTTTGATAATGAGGCAATTGCTGTGAATTTACCACTTTCTTGTCTCATAAATTACCCATCATTGGTTCCTTCAGTCCTTCACTTTGTAAAGCAGCTTAGGCCAAAAGTAGTGGTCACTTTCAATAGAAATTGCGATCGCATTGATGTACCATTTTCCACCAATATAGTCCATACTCTTCAATGTTTCTCGGCCTTGCTTGAGTCACTAGATGCAGTAAATCTGAGCTCGGACGTCCTCCATATAATCGAGAGGCATTTCATCCAACCAGCCATTAAGAAAATCATATTCGGCCATCAACGCTCACACGAAAAGTTACCTCCTTGGCCGAATCTGTTTCTTCAAACCGGATTCTCTCCGATCACATTTAGTAACTTCACGGAAGCTCAAGCCGAGTGTTTAGTACAGAGGGCACCGGTGCGGGGATTCCAAGTCGAGAGAAGGCATTCATCTCTTGTCCTATGCTGGCAAAGGAAAGAACTTATCTCAGTTTCAACTTGGAGATGTTGA 2088 0.4262 MPLPFEEFQEKGVLDFCSSAASDSFSLLWHQQPQNLSIDKGFYCYVGTEPNSVLDSRRSPNPSLSSSTMSSSVAATNLSENPLHASLESSTEKCDMRMEDWEGQDQSIMRLIMGDVEDPSAGLSKLFQTGGCGYQNVDFNRGFGVVDEGLNMVSIIDPSVQVNYHAFPFVENIDCYSAKTGSVSVSESIPVSANSSLLVLSSPGVFNSQQQQLQQQGIGVVDEKPRLINPQLMLNQNQARLSNNPSFFVPLTYPQMQEQEVFSQHQAERPLSDTVGHNYQVPRFPLLDCGQELFARRQQKQLPLFPHHHLQQLQPLVVPSAKQKKVNSTGDDASNQLQQSIFDQLYKTAELIEAGNPVLAQGILARLNQQLSPVGKPFQRATFYMKEALQLLLNSNIHNSIAFSPINFIFKIGAYKSFSEISPVLQFVNFTCNQALVEALEKFDRVHIIDFDIGFGEQWSSFMQELALRNNSATSLKVTAIVSPSTCDNDELNFIRQNLNQYAKDINMFFELDVLSIESLNSPSCQFFDNEAIAVNLPLSCLINYPSLVPSVLHFVKQLRPKVVVTFNRNCDRIDVPFSTNIVHTLQCFSALLESLDAVNLSSDVLHIIERHFIQPAIKKIIFGHQRSHEKLPPWPNLFLQTGFSPITFSNFTEAQAECLVQRAPVRGFQVERRHSSLVLCWQRKELISVSTWRC 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0266 695 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 694 IPR005202 -
Lal19g0266 695 Pfam GRAS domain family 343 694 IPR005202 -
Lal19g0266 695 ProSiteProfiles GRAS family profile. 332 694 IPR005202 -
Lal19g0266 695 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 5 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0266 Lal-Chr19 2665116 2667203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0266 340 695 GRAS Transcription Factor Family AT4G00150 54.571 1.65e-122 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal19g0266 GRAS 7.9e-91 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0266 - - gmx:100801785 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0266 19 2665116 2667203 Lal19g0266 19 2665116 2667203 ECH