Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0254 ATGTCTGCCTCATCCACTTCCTTTTCACCGGACCAACAACAACAACACCACCTTTCTCCCTCCGACCAACTTTGTTATGTCCATTGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACAAGTTTGTTCAAGAATGTGACTGTGAGATGTGGTCATTGCACCAACCTTTTGTCTGTGAACATGCGTGGCCTACTCCTTCCTCCTAGTAATCAGCTTCACATTGGACACAACTTCTTCACACCTCAAAATCTTATGGAGGAGATTCGAAATGCACCTTCAACAAACATGGTGATGAATCAGCTTCCTATTCCAAATGATTTGGTCATGAACACTATGCGTGGAGTACCAGAAGAAACCCCTAAGCCTCTACCAGCTAATAGACCTCCTGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGATGAGATCCAACGTATAAAAGCTGGGAATCCTGATATAAGCCACAGAGAAGCCTTTAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATATTCACCAGGAAGCAGAAGACATGCTTTTGAAAGATGGGTTTTTTTCACCTGCAAATGTAGGTGTCACTCCCTACTAG 660 0.4485 MSASSTSFSPDQQQQHHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKNVTVRCGHCTNLLSVNMRGLLLPPSNQLHIGHNFFTPQNLMEEIRNAPSTNMVMNQLPIPNDLVMNTMRGVPEETPKPLPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANIHQEAEDMLLKDGFFSPANVGVTPY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0254 219 MobiDBLite consensus disorder prediction 118 137 - -
Lal19g0254 219 PANTHER PROTEIN YABBY 6-RELATED 1 217 IPR006780 GO:0007275
Lal19g0254 219 Gene3D High mobility group box domain 122 200 IPR036910 -
Lal19g0254 219 SUPERFAMILY HMG-box 128 177 IPR036910 -
Lal19g0254 219 Pfam YABBY protein 20 183 IPR006780 GO:0007275
Lal19g0254 219 PANTHER PROTEIN YABBY 4 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0254 Lal-Chr19 2490366 2494146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0254 31 217 C2C2-YABBY Transcription Factor Family AT4G00180 61.722 7.88e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lal19g0254 YABBY 5.4e-73 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0254 K25796 - gmx:100794423 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0845 14 10653582 10657135 Lal19g0254 19 2490366 2494146 LSH