Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0234 ATGAGTATGAATTCTAGCTCGAATGCCCGTGGAGATCGAAGAAACAATGTAGGTGGTGGTAATGGTGGTGGTTGTGGCCCTTGTGGCGCGTGTAAATTCCTTAGGAGAAAGTGCTTGCCAACTTGTATCTTTGCACCTTACTTCGATCCGGAGAATGGTGCAAACCACTTTGCGTCCGTGCATAAGATTTTCGGGGCGAGCAATGTGTCCAAGCTTCTCAATACGATTCCGATGCACATGAGGTCCGATGCGGTGCTTACCATTGTTTATGAAGCTCAGGCTAGGATGAGAGACCCTATTTATGGTTGTGTTTCTCATATCTTTACTCTTCAGCAACAGATTACTACTTTACAAAATGAACTCTCATATTTGCAAGCCCAACTTTTGGAACTACCCCAACCACCACCACCTCTGCAGCAAGCAGCCATGGCTGCTGCAATGCCAGCCACATATGATTTATCCACACTTTTTGACCCTATGGCTCAACAATCTCCAAGGAACATGATGCAGCAAAGGGCCATGGACCTACGTTATCAGTATGTAGGTGCTACCACATTGCCCAGTGCTAGTGCTAGTGGTGGTGGTGGTGGTGGTGGCGGCAGTGGTGTTATTAGTTATGTCGGTGGTGGTGGTAGTGGTGTCAATGCTTCTGGTGTTGGTAATGGTGTCAATGCTTCTGGTGTTGGTAATGGTGTCAGTAGTGGTGGTGGTGCTGCTAGTGGTGTAGTTAATGGTGTCGGTGTCGGTGGTGGTGGTGGTGATTTTCATAGTTTGGCTCGTGAACTTCTTCATAGAATTGGAAATGCTACTGTTGCTGTTGCTCCTGGTGTGGCTGGCACTAGTGCCAAGTGA 852 0.4777 MSMNSSSNARGDRRNNVGGGNGGGCGPCGACKFLRRKCLPTCIFAPYFDPENGANHFASVHKIFGASNVSKLLNTIPMHMRSDAVLTIVYEAQARMRDPIYGCVSHIFTLQQQITTLQNELSYLQAQLLELPQPPPPLQQAAMAAAMPATYDLSTLFDPMAQQSPRNMMQQRAMDLRYQYVGATTLPSASASGGGGGGGGSGVISYVGGGGSGVNASGVGNGVNASGVGNGVSSGGGAASGVVNGVGVGGGGGDFHSLARELLHRIGNATVAVAPGVAGTSAK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0234 283 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 173 - -
Lal19g0234 283 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Lal19g0234 283 Coils Coil 107 127 - -
Lal19g0234 283 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Lal19g0234 283 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0234 Lal-Chr19 2226148 2228280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0234 30 180 AS2 family AT2G45420 56.069 5.41e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal19g0234 LOB 1.2e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0234 19 2226148 2228280 Lal19g0234 19 2226148 2228280 ECH
Lal14g0890 14 11264785 11270640 Lal19g0234 19 2226148 2228280 LSH