Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0223 ATGGCAGAGGAAAAGGGAAGAGTTTGTGTGACAGGAGGCACAGGATTCATTGCTTCAATGATGATTAAGAGACTCTTATCAGAAGGTTTTTATGTGAACACCACTACCAGATATACTCCAGGTAAAGATGTTAGCTTTCTTACAAATTTACCTGGTGCATCTGAAAAGCTAAGGATTTTCAATGCTGATCTCAACAACCCTCAAAGTTTCTGTTCAGCAATTGAAGGGTGCAAATGGGTCTTCCACACAGCTTCTCCAGTGGATTTGGAAGAACAAGTTGAAATAATGTCAAAAAGAGCAGTGGATGGAGCTTTAGGAGTTTTAAAAGTATCATTAAATTCAAAGACTGTGAAGAGAGTTATTTTCACTGCAAGTTGCACTAATGTTACTTATAGTGGTGAAGAAGTTGATGAATTGAATGAGAGTTATTGGAGTGATATTCATTTTATTTATAAGACAAAACCTACTAATTGGTCTTATTCTGTTTCTCAGCTTTTGGCAGAGAAAGCAGTTCTTGAATTTGGAGAAAAACATGGATTAGATGTTGTCACAATACTTCTTCCTTTTGTTATTGGACCATTCATTTGCCCAAAGCTTCCTGGTTCAATTCAAATGGCACTGCCTTGGTTATTTGGTTATGAAGATGATATTTTCACTTCTTTCTCAATAATACATGTGGATGATGTGGCCAGAGCCCATATTTTTATGCTTGATCATTCAAGCATAAAAGGGAGATATATTTGTTCATTAAATGGTACTTTATCAATGGAAGAGATAGTTGAACTAGTTCATGACAAATACCCAGAATTCCAAATACCAACATTAGACAAGGTGAAAGAAATCAAGGGTGAGAAAATGCCAAGTTTGAACTCCAAGAAGCTCATTGATGCTGGATTTGAGTTCAACTATGGGACTAAGGAAACATTTGAAGAATCAATTCAATGTTGTAAGGTTAATGGTTATTTGTAG 969 0.3571 MAEEKGRVCVTGGTGFIASMMIKRLLSEGFYVNTTTRYTPGKDVSFLTNLPGASEKLRIFNADLNNPQSFCSAIEGCKWVFHTASPVDLEEQVEIMSKRAVDGALGVLKVSLNSKTVKRVIFTASCTNVTYSGEEVDELNESYWSDIHFIYKTKPTNWSYSVSQLLAEKAVLEFGEKHGLDVVTILLPFVIGPFICPKLPGSIQMALPWLFGYEDDIFTSFSIIHVDDVARAHIFMLDHSSIKGRYICSLNGTLSMEEIVELVHDKYPEFQIPTLDKVKEIKGEKMPSLNSKKLIDAGFEFNYGTKETFEESIQCCKVNGYL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0223 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 316 IPR036291 -
Lal19g0223 322 PANTHER DIHYDROFLAVONOL REDUCTASE 1 312 - -
Lal19g0223 322 Pfam NAD dependent epimerase/dehydratase family 8 240 IPR001509 -
Lal19g0223 322 Gene3D - 5 322 - -
Lal19g0223 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 312 - -
Lal19g0223 322 CDD FR_SDR_e 8 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0223 Lal-Chr19 2034195 2036025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0223 1 322 Monolignol Biosynthesis Gene Families AT2G02400 34.835 1.78e-52 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0223 - K13265 lang:109345855 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0223 19 2034195 2036025 Lal19g0223 19 2034195 2036025 ECH