Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0222 ATGGAAGCAAAGCCTCTTCGAAGTGTTCCCTTTTCACACAACAAAACTTCTGGAGAAGAAAGTGAACCCCATAAGAAGAAGAATGGTGTTATTCTTGTTAATGATGAAGAGAAGAAAAGGGTTGTTGATGTTATGGTAAAAGAAGTGAATAGTGTTATAGTTAGTGCTGTTCACACTGAACCAATAAACAAAAACACTTTGATCAAAGCACCACACTATTATCACAAGTGTTGTATTTTTACTGAGGCACAAAGGAGTGAACTTTACCATCAAGTTCTTATCTTTAACCACTTTGCATGTAACCTCTTTCTTAACCATCACCACCACCTTGTTGCTGCATTTCCAAGCTATATGTCAGGATACAGTAACCAGGGTTATGATTATGGGAGCATGATGATGGATCTTGAACCACAGAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGTAGTAGGAATGTAGTGCCGAATCAAAAGTACTGCGAAAGGCACATGCATCGAGGTTGTAATCGTTCAAGAAAGCGTGTGGAAACATCTCAACTTAACTCTTCTTTGATAATAAACCCTTCTGGCAAGTTACAAACCAAACTAACCTCATCAAATGCAGAATCTGCAGCTTCAAATGCAGACCCTTTAGGCACTCGACACATTAAAATGTCTTCGTGTGCCGAACCAAGGAACCAACGTGTTGCCGATACCTCATCGATTAATAGTAGATTGAAAACTATCGTAGGTTCTGATGATTACCTCAACTCATTTTCGCCAGCTACTGCAATTGCCCCTTTGGTGACTACTTTCAGTAACTCGACTTCGGTTGCTTCGGATAGCAGAAGAGGCCTACTTTTATGCAAGAAAGATAACCAGACCAAGAGCTGTGTCAGCGACAATGTCGGTGTTAAAAGTGGTGCGAAAGGAAGCATCATCTCTGCTGGAATAGGCTTCTCCCCAAGGAGTGTTCTTCAGGGTAATAACTATAGTATTAAAGGCGATCCATTCCCCTACACAAACTCTAAAACAATCAAACCTTTAGCATTAAGTGGGGTCGGCTACATCGACTTTAGCATGCCTATGAAGGACTTAAATCTAACTTCAGAATCTCTGTTATCGGTCAAAGGTAACCCTTCGCCTGGTCCGGCATGCTTATGTGGAGGGGGCATGCCGGAAATAGTTTCTGGCTGCAATAATTCATACATCAATGACAGAAACAATGTGGAACTCGAACCTGGCAGGTGCCGAAGAACCGATGGTAAGAAGTGGCGATGCAAAAGCCCTGTTATTTCTGGTCAGAAGTATTGTGCCAATCACATGCACAGAGGTTCTAAAAGGCGATTCCCCGAATATGAACCAGCTGCAACCGATTCTGCTGTTACCATTGCTCAGCTGCCTTGCTCCACAGCCACAACCAACATCCAGAAAGCACATTGTTCAATTCCGAATACGAGTCTTTCCATGTCAATCCCCGAAAGTGCGGCGCCATTGATAAAATGTAATGAGAAAAGTCCTTGCAGAAATGACACCAACACCATGGATGACTATAGCTATGCTTCTTCATAA 1554 0.4234 MEAKPLRSVPFSHNKTSGEESEPHKKKNGVILVNDEEKKRVVDVMVKEVNSVIVSAVHTEPINKNTLIKAPHYYHKCCIFTEAQRSELYHQVLIFNHFACNLFLNHHHHLVAAFPSYMSGYSNQGYDYGSMMMDLEPQRCRRTDGKKWRCSRNVVPNQKYCERHMHRGCNRSRKRVETSQLNSSLIINPSGKLQTKLTSSNAESAASNADPLGTRHIKMSSCAEPRNQRVADTSSINSRLKTIVGSDDYLNSFSPATAIAPLVTTFSNSTSVASDSRRGLLLCKKDNQTKSCVSDNVGVKSGAKGSIISAGIGFSPRSVLQGNNYSIKGDPFPYTNSKTIKPLALSGVGYIDFSMPMKDLNLTSESLLSVKGNPSPGPACLCGGGMPEIVSGCNNSYINDRNNVELEPGRCRRTDGKKWRCKSPVISGQKYCANHMHRGSKRRFPEYEPAATDSAVTIAQLPCSTATTNIQKAHCSIPNTSLSMSIPESAAPLIKCNEKSPCRNDTNTMDDYSYASS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0222 517 MobiDBLite consensus disorder prediction 1 27 - -
Lal19g0222 517 PANTHER - 41 260 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal19g0222 517 PANTHER - 397 474 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal19g0222 517 PANTHER GROWTH-REGULATING FACTOR 9 41 260 - -
Lal19g0222 517 PANTHER GROWTH-REGULATING FACTOR 9 397 474 - -
Lal19g0222 517 ProSiteProfiles WRC domain profile. 134 178 IPR014977 -
Lal19g0222 517 ProSiteProfiles WRC domain profile. 405 449 IPR014977 -
Lal19g0222 517 Pfam WRC 407 446 IPR014977 -
Lal19g0222 517 Pfam WRC 136 177 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0222 Lal-Chr19 2015980 2019890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0222 321 484 GRF Transcription Factor Family AT4G37740 34.682 4.95e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0222 - - lang:109350547 531.561