Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0221 ATGGTCTCTCAACGACTTCGAAATCGGAAAACCTCTCGGCAGAGGAAAATTCGGCAGAGTCTACGTCGCCAGAGAACTCAAGTGACATCCACAACTGCTTCACCCTGCAATTGTAGTGTGATAATGAATCACAATGATGCAGTCGCATTGGGATGTAATCAACCACATTTGGCCCATATCGCCACGATTGCAATCTGCATCACAACAACTGCAATGACCATAATCGTAATACTGACAATCATGACTGTAGACGCAATTCAAAACGCTAGTACTAATGATAGCAAATTTGTGGTTGCATTGAAGGTTATTTTTAAGGAACAGCTTGAGAAGTACAGAATTCAAAATCAACTGAGGAGAGAGATGGAGATACAGAAGAGTCTTAACCACCCAAACGTGCTGCGTCTGTATGGTTGGTTTCATGATGCTGACCGTGTTTTCTTGATTCTTGAATATGCTCATAATGGTGAGCTTTACAAGGAGCTTAGCAAAAGAGGTCATCTCACTGAGAAGCATGCTGCAACGTATATTTTGAGTCTCACAAAGGCATTGGCATATTGTCATGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGCTGCTTGACCATGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTACAGTCCAGAAACAAAAGAAATACCATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTAGAAAACAAAGCTCATGATTATTCAGTTGATAACTGGACTCTTGGTATCCTTTGTTATGAATTCCTCTATGGTGTTCCTCCATTTGAGGCTGAGAGTCAAGCCGATACATTCAAAAGGATAATCAAGGTTGACCTAAGGTTCCCTTCTAATCCTTTAGTTTCTTCGGATGCCAAAAATCTGATCAGTCGGCTCCTTGTGAAAGACTCCTCACAGAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTATTGGTATCTGCAAGTAG 1005 0.4109 MVSQRLRNRKTSRQRKIRQSLRRQRTQVTSTTASPCNCSVIMNHNDAVALGCNQPHLAHIATIAICITTTAMTIIVILTIMTVDAIQNASTNDSKFVVALKVIFKEQLEKYRIQNQLRREMEIQKSLNHPNVLRLYGWFHDADRVFLILEYAHNGELYKELSKRGHLTEKHAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRNKRNTMCGTLDYLAPEMVENKAHDYSVDNWTLGILCYEFLYGVPPFEAESQADTFKRIIKVDLRFPSNPLVSSDAKNLISRLLVKDSSQRLSLQKIMEHPWIIKNANPIGICK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0221 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Lal19g0221 334 SMART serkin_6 72 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0221 334 Pfam Protein kinase domain 90 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0221 334 ProSiteProfiles Protein kinase domain profile. 72 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0221 334 CDD STKc_Aurora 94 323 - -
Lal19g0221 334 SUPERFAMILY Protein kinase-like (PK-like) 93 326 IPR011009 -
Lal19g0221 334 Gene3D Transferase(Phosphotransferase) domain 1 82 331 - -
Lal19g0221 334 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 89 329 IPR030616 GO:0004672
Lal19g0221 334 MobiDBLite consensus disorder prediction 1 28 - -
Lal19g0221 334 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0221 Lal-Chr19 2009966 2014032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0221 98 329 CBL-interacting serine-threonine protein kinases AT5G10930 39.749 1.90e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lal19g0221 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0221 K08850 - gmx:100800111 441.425