Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0191 ATGGAATTCAAACTTAACATGAATACTAAGAAGAAACCCCTCAAACCCCATCTTCAACGTCTCAACGCTGTTAAGAACTTCGATTACAAACCCCCAACAACACCCACTACTTCATCTCTCACTTCTTCTTCTTTGGACCATGAAAATGATTTCAGGGTCACAGGAAATGATGGAGAATTCGAACGAATCTTCCGAAGTTTGGGGCTTTCTGGACCTGAAGACTTTGCTATTCCAACTGCAGATTGGGAAGCTCGAAAGGCTCGTTTTTCTGCTTCTTCTAATGATGGTAAGAACAAGTTAAACGAAGAGGGTGAAGTTAGTGTTGTAGTTTTAGATGAATTAGGAAATGGGGTTGTTAAAAATGATAGCTTTATGATACCCTTTAAAGGGGAACATGTTTCTTCTGATTCTAAGGTTTTGGGTTGTGAAAATGAAGATGGGGTTGTAGGAAAAAAGCCTCCAATTTTGGTGGGTTCTAGTTGGGGTTTGAATTTGGTGAGGAATTTTGATGATAGTGGTGTTGGTGTTGTTGATTTGTTGTGTTCTTCAAGTGAACATGATGTTGTTGGTAGAGTGAGAAATGGGGAAAGGAGCATGATTTTTTCTGATTCGGGTTCGTTTACTACTTCGCATGATGATGATAGTGATGTTGGTGGTGAAAGGGGTTGTTCTGGTTCTGGTGTGGTTCATGAATTGGTTCATAATGTTGTCTCAACAAATGGTTGGCTTAGAAGATCTTTCTCTTCATGGCAAAAGGGTGATGTTTTGGGAAAAGGGTCTTTTGGAACTGTATATGAAGCCTTTACCGATGATGGATTCTTTTTTGCGGTGAAGGAGGTGTCTTTGCTGGATGAAGGTAACCATGCCAAACAGAGCATTTTCCAACTTCAACAGGAAATATCTCTTTTGAGTCAATTTGAACACGAAAACATAGTTCAATATTTAGGCACAGACAAGGACGAAAGTACACTATATATCTTCCTCGAGTATGTGTCAAAAGGGTCATTGGCAAGTCTCTATCAAAAGTATCGTTTAAATGATTCTCAAGTTTCGGCATACACTAGGCAGATTATAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTCCACAGGGATATCAAGTGTGCTAATATACTTGTTGATGTGAGTGGGTCAGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACCAAATTAAACGATGTTAAATCAAGCAAAGGCTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAAGAACCAAGGTTATGGACTAGCAGCCGATATATGGAGCTTAGGGTGTACAGTTTTAGAGATGTTGACAAGGCAGCCTCCTTACTCTGATTTGGAAGGGATGCAAGCATTATTTCGGATTGGCCAGGGTGAACTTCCACCTATTCGTGAATCTTTATCAAAAAATGCTCGAGATTTCGTTCTTAAATGCTTGCAAGTTAACCCGAATAAACGCCCAAGTGCGGCTCAGCTAATGTATCATCCATTTATAAGGAGACCATTTCTATCTCCTGCAAGTCCTTCTTCTCCACATAGTAATATCTTTCGGTTTTAA 1572 0.4014 MEFKLNMNTKKKPLKPHLQRLNAVKNFDYKPPTTPTTSSLTSSSLDHENDFRVTGNDGEFERIFRSLGLSGPEDFAIPTADWEARKARFSASSNDGKNKLNEEGEVSVVVLDELGNGVVKNDSFMIPFKGEHVSSDSKVLGCENEDGVVGKKPPILVGSSWGLNLVRNFDDSGVGVVDLLCSSSEHDVVGRVRNGERSMIFSDSGSFTTSHDDDSDVGGERGCSGSGVVHELVHNVVSTNGWLRRSFSSWQKGDVLGKGSFGTVYEAFTDDGFFFAVKEVSLLDEGNHAKQSIFQLQQEISLLSQFEHENIVQYLGTDKDESTLYIFLEYVSKGSLASLYQKYRLNDSQVSAYTRQIISGLKYLHDRNVVHRDIKCANILVDVSGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLKNQGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFRIGQGELPPIRESLSKNARDFVLKCLQVNPNKRPSAAQLMYHPFIRRPFLSPASPSSPHSNIFRF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0191 523 Gene3D Transferase(Phosphotransferase) domain 1 247 517 - -
Lal19g0191 523 SMART serkin_6 250 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0191 523 ProSitePatterns Protein kinases ATP-binding region signature. 256 278 IPR017441 GO:0005524
Lal19g0191 523 MobiDBLite consensus disorder prediction 29 46 - -
Lal19g0191 523 MobiDBLite consensus disorder prediction 27 46 - -
Lal19g0191 523 PRINTS Tyrosine kinase catalytic domain signature 328 341 IPR001245 GO:0004672|GO:0006468
Lal19g0191 523 PRINTS Tyrosine kinase catalytic domain signature 363 381 IPR001245 GO:0004672|GO:0006468
Lal19g0191 523 PRINTS Tyrosine kinase catalytic domain signature 429 451 IPR001245 GO:0004672|GO:0006468
Lal19g0191 523 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Lal19g0191 523 ProSiteProfiles Protein kinase domain profile. 250 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0191 523 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 8 106 - -
Lal19g0191 523 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 143 505 - -
Lal19g0191 523 SUPERFAMILY Protein kinase-like (PK-like) 233 516 IPR011009 -
Lal19g0191 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Lal19g0191 523 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 8 106 - -
Lal19g0191 523 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 143 505 - -
Lal19g0191 523 Pfam Protein kinase domain 251 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0191 Lal-Chr19 1708695 1716512 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0191 247 507 MAP Kinase Kinase Kinase AT4G08500 66.794 1.28e-124 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal19g0191 Pkinase 5.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0191 - K13414 aip:107631583 651.358