Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0138 ATGGATGATGATGTGCTAAACATGTCCAATTGGGGTTATTACGAACCCTTCAAAGGAGGGCATCTTGGTCTGCATCTCATGACAGATCCTGACACAAAACCATTTTTTCCTGGACGTGATCCATCTATGTTTGTCGGTGCAAGCGATCGGGACTCAAAACCATTTTTATCTGGTCATGATCCATCTATGTTTATTAGTGTGAATGATCGTGACTCAAAGCCTTTTTTGTCTGGTCGTGATCCATCTATGTTTGTTGGTGTGAATGATCGTGACGTGAAGCCACTTTTGCCTGGTCGTGATCCATCTATGTTTATTGGTGCGAATGGAACCATGCACCCACGAGATTGTGTTGTTTCGGAGGCGCCAATGTCGATGAACTATGTAAGGGATGGTTGGATAAGCCTGAGGGACAGGTTTTTTAATATGCCGCCTGTCACTCCTGATAATGCTGTTCTTCCAGAATCATCAGCACCCTCCACCATGCAAACTACACAGCTACCCGACACTTCAAGAAATGAGAAGGTGGATAGCATTGAAGACTCGGTTGTTAAAAAAGTTGGCCAATCAAAGAAAAGGCAAAGTACGGGTGTTTTAACTTCTCCAAAGGCTAAGAAACTGAGGAAGCCAAAGGATAATAGCGATGCTTCAGTTCAACATGTGAAGCCCATTAAGAAGACTAAAGAGCTTCTCATAAATGGAATTGATATGGACATTTCTGGCCTACCCATTCCAGTTTGTTCATGCACTGGTACTCCTCAGCAGTGTTATCGCTGGGGCTGTGGAGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCGATATATCCTTTGCCAATGAACGTAAAAAGGCGTGGTGCAAGGATAGCTGGACGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCAGCTGAAGGTTATAATTTTGTAAACCCGATCGATCTGAGGACTCATTGGGCCAGACATGGAACCAACAAGTTTGTAACTATCAGGTAG 1005 0.4358 MDDDVLNMSNWGYYEPFKGGHLGLHLMTDPDTKPFFPGRDPSMFVGASDRDSKPFLSGHDPSMFISVNDRDSKPFLSGRDPSMFVGVNDRDVKPLLPGRDPSMFIGANGTMHPRDCVVSEAPMSMNYVRDGWISLRDRFFNMPPVTPDNAVLPESSAPSTMQTTQLPDTSRNEKVDSIEDSVVKKVGQSKKRQSTGVLTSPKAKKLRKPKDNSDASVQHVKPIKKTKELLINGIDMDISGLPIPVCSCTGTPQQCYRWGCGGWQSACCTTNVSIYPLPMNVKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFVNPIDLRTHWARHGTNKFVTIR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0138 334 SMART GAGA_bind_2 1 334 IPR010409 -
Lal19g0138 334 Pfam GAGA binding protein-like family 86 334 IPR010409 -
Lal19g0138 334 MobiDBLite consensus disorder prediction 204 218 - -
Lal19g0138 334 MobiDBLite consensus disorder prediction 172 187 - -
Lal19g0138 334 MobiDBLite consensus disorder prediction 152 171 - -
Lal19g0138 334 PANTHER - 89 334 IPR010409 -
Lal19g0138 334 PANTHER - 1 46 IPR010409 -
Lal19g0138 334 MobiDBLite consensus disorder prediction 149 218 - -
Lal19g0138 334 PANTHER BNAA06G09500D PROTEIN 89 334 - -
Lal19g0138 334 PANTHER BNAA06G09500D PROTEIN 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0138 Lal-Chr19 1161149 1162153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0138 1 48 BBR or BPC Transcription factor family AT2G01930 50.909 5.91e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lal19g0138 GAGA_bind 1.4e-92 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0138 - - lang:109351244 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1062 14 12827619 12829892 Lal19g0138 19 1161149 1162153 LSH