Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0121 ATGGCTGAGGCGACAGGGCGGAGCAGGGTGGTCGGAGATTACATAGTTGGGAAGCAAATCGGAGCTGGCTCGTTTTCGGTGGTGTGGCACGGAAGACACAAAGTTCACGGAACCGAAGTAGCGATAAAGGAAATTGTTACTCTTCGTCTTAACAATAAGTTGCAAGAGAGTCTCATGTCTGAGGTTTCCATCCTCAATCAGATTAATCATCCTAACATCATTCGTTTGCACGAAATCATTCAGGCTCCCGGTAAGATACATATTGTGTTAGAATATTGTAAAGGGGGAGATCTCTCTCTGTACATACAACGCCATGGAAGGGTACCGGAGGCTACTGCAAAGCATTTTATGCAGCAACTTGCTACGGGTCTACAAGTTCTTCGGGACAATAACCTTATTCACCGAGATCTGAAACCACAGAACCTTCTTCTCTCCAGAAATGATGAGAGGTCAGTGTTGAAGATCGCTGACTTTGGATTTGCCAGATCTCTGCAACCTAGGGGCCTTGCAGAAACGTTGTGTGGTTCACCGCTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCTATCTTATTTCAGCTTGTTACTGGAAAGACACCTTTTACCGGAAACAATCAAATACAGTTACTACAGAACATTATGAAATCAACAGAATTGCAGTTTCCTTCTGATAACCAAAGTCTGAGCATTGACTGCAAAGATTTGTGTCGCAAATTGCTACGCCGTAATCCAGTGGAACGTTTAACTTTTGAAGAATTCTTTAACCACCCATTCCTTTCTCAGAAGCAACCAGAGCTAGATGAACCATTGAGGAGCAGAAGTTCTTCGCGGCTGGTAGGCGAGTGTTGTTCAACAGAGTCTGACCCTTTAAGAAGGACCGAGGAAAAGTATCAAGAGGACTGCTTGCCTTTCTCTCTAGATGTTGATTCTAGTGGTGCTGAGGGGATCCCTTCCTTTTCAAGGAAGAAGTCCTCAATCAAGTCTACCTATGGATTTGATCTAAATACAATACTAGATAAAGTAGAGCCAACGTCTCCTATTTCGAATAACGTAAGTTATACCTCAAAATATGATAGTCTTGCACAGAGACCTGAAAACACTACAAGAAGATTGGACAACCATAAAATATCAAGAAATCTCACTGATCCTCCAGAACAGAGATTTGTGATCCCTCATTCAAAAGTCACTGATTCACTAGAGAATATTGATCAAGATTATGTTCTCGTGTCTGGGCCACCTATGGATGTTTCACCGTCATTGGTGAGTGATTCAAAGATGAGTCATTCCCAATATAGGCCAGGCAATGTACCCCAAGATCCTTCTAATACAATGACTAAGTTAAGTGCTCCTATGCCAATTGTTGTTGCACCTACCAGTAGCACATACCAAATTGGAAGTTCAGAAAGTCGGGACTCTGCTCCTGGGACCTCACATGGATCGATAGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACACGGATAAAATCATTGAAACAGTGTGCATCCGCCATCACGGAATTAGTTAATGAAAAGATAGAGGCAGGAAAGCAGCTTGAAGCATTCTCTATTCGGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTGCACATGTGCCATACTCAGGCTGCTTCAGCCATGGAAGGAAATCCAAGTCAAGAAACTTCAAGATATAGGAGGAGCACCAGCAAGAAGCATGGCAGTTTTGATTTGGAAGGATGCATTCTTGGAAACACCCAAGGGTCAAAAGATATATTACCGCAAATTGAAAGTGAATTTCTGAAGGAATTCGAACATGCTGAAGAGCTTGCGAAGGCCATTGAACCTGGAAATGCAGAGATGCCAGATGCAATGGAGACGATATTTCAATCTGCCCTTGCTTTTGGTAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGAAAGTGCTGCTGCATTGTATTCGAAAGCTGTCCGTCTGATAGTCTTCCTTCTAGTGGAAGCACCATCCCTGATTCTTAATCCTCCATTTTCACTGACAAACTCAGACCGCTACCGACTTCGGACTTACATCGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCTCAGCGAATCGACCTTCTGAAATGTGATGACAGTCAAGGCATGCTTAAGGAAAAGTTTTAG 2190 0.4333 MAEATGRSRVVGDYIVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIVTLRLNNKLQESLMSEVSILNQINHPNIIRLHEIIQAPGKIHIVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLATGLQVLRDNNLIHRDLKPQNLLLSRNDERSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNIMKSTELQFPSDNQSLSIDCKDLCRKLLRRNPVERLTFEEFFNHPFLSQKQPELDEPLRSRSSSRLVGECCSTESDPLRRTEEKYQEDCLPFSLDVDSSGAEGIPSFSRKKSSIKSTYGFDLNTILDKVEPTSPISNNVSYTSKYDSLAQRPENTTRRLDNHKISRNLTDPPEQRFVIPHSKVTDSLENIDQDYVLVSGPPMDVSPSLVSDSKMSHSQYRPGNVPQDPSNTMTKLSAPMPIVVAPTSSTYQIGSSESRDSAPGTSHGSIDTGDEQPSAHCMTRIKSLKQCASAITELVNEKIEAGKQLEAFSIRLVILAIWKQALHMCHTQAASAMEGNPSQETSRYRRSTSKKHGSFDLEGCILGNTQGSKDILPQIESEFLKEFEHAEELAKAIEPGNAEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLIVFLLVEAPSLILNPPFSLTNSDRYRLRTYIDILNNRQGYSRSQRIDLLKCDDSQGMLKEKF 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0121 729 CDD STKc_ATG1_ULK_like 20 270 - -
Lal19g0121 729 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0121 729 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0121 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Lal19g0121 729 MobiDBLite consensus disorder prediction 470 501 - -
Lal19g0121 729 MobiDBLite consensus disorder prediction 470 496 - -
Lal19g0121 729 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0121 729 Gene3D Transferase(Phosphotransferase) domain 1 5 315 - -
Lal19g0121 729 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 4 703 - -
Lal19g0121 729 MobiDBLite consensus disorder prediction 431 453 - -
Lal19g0121 729 SUPERFAMILY Protein kinase-like (PK-like) 10 469 IPR011009 -
Lal19g0121 729 MobiDBLite consensus disorder prediction 432 453 - -
Lal19g0121 729 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lal19g0121 729 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 703 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0121 Lal-Chr19 992162 999392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0121 10 271 CBL-interacting serine-threonine protein kinases AT2G30360 38.060 8.74e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lal19g0121 Pkinase 9.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0121 K08269 - gmx:100791596 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0121 19 992162 999392 Lal19g0121 19 992162 999392 ECH