Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0119 ATGGATTTTAATCTTCAAAACTCGGATAAATCTGAACACACGAGATGGGTTTCTAATGATCAAGGTGGTGTTGGACAAGTTAGGTCATTTACTTGTGCTTTTTGTAAGAGAGGATTCTCAAATGCACAAGCACTTGGTGGTCACATGAATATTCATAGAAGAGATAGAGCCAAACTTAGACAATCTTGTGAAGAAAACATTATTTCTTTAGATATGAAGAAAACCAATGATCATGATGAAGTTCTTCATCAACTTATTAAGGATCATGATGATCATGGTGCACTTCAAAGGGGCAAGGAAATTGAGGTTCCTCTATTTTTTGGGAGACAAAGTTCTAGCAATGAAATAAGGGCAAATAGTGTTGTAATGGAGATAATTGAAGAGAAGAAAAGTGATTTAGATCTTGAACTACGTTTAGGTCCTCAACCACAAGTGACGCCAACTTTCAGCACAAGAGAATTCTTTTAA 468 0.3568 MDFNLQNSDKSEHTRWVSNDQGGVGQVRSFTCAFCKRGFSNAQALGGHMNIHRRDRAKLRQSCEENIISLDMKKTNDHDEVLHQLIKDHDDHGALQRGKEIEVPLFFGRQSSSNEIRANSVVMEIIEEKKSDLDLELRLGPQPQVTPTFSTREFF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0119 155 MobiDBLite consensus disorder prediction 1 20 - -
Lal19g0119 155 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Lal19g0119 155 MobiDBLite consensus disorder prediction 1 16 - -
Lal19g0119 155 PANTHER OS07G0101800 PROTEIN 1 148 - -
Lal19g0119 155 Gene3D Classic Zinc Finger 6 91 - -
Lal19g0119 155 SUPERFAMILY beta-beta-alpha zinc fingers 28 56 IPR036236 -
Lal19g0119 155 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Lal19g0119 155 PANTHER TRANSCRIPTIONAL REGULATOR TAC1 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0119 Lal-Chr19 976591 977058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0119 26 151 C2H2 Transcription Factor Family AT3G53820 37.209 1.68e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal19g0119 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0119 - - lja:Lj1g3v3443990.1 146.747