Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0108 ATGGCACTGAATAAAGCAAGAAACCTGTTAGGTACCAATACTAGGAAGGATCATAGTTTGTTGCCCCCCTTTTCGAATGCAACAGGTCAGGGCGTACATAACGATATCTCTGTTTGGGAAGAGGAAGAATTTTATGTGCCATTTGGTAACAACGGAATTGCTTCTAGAAGAGTTTCTGCTTCACCTGAGAGATACTGGAAGCATGAAGATAGATTTGGGTTGAGTAGGGAGAATGGCCATGTCAAGTATGAAGGTCTTACTAAAATTTTGGGGTTGAGGAGAATGGAATCCGAGAGTTCTGAGATAAGCGATTTTATTTCTTCTATAAAAGAGCCAACCCAGGAGATGGAGAATGGGATAAGCAAAAGCAATAAGGAAGCTGGTGATTCCCATTCCTCAAGGAAGGTCATTGGTGAGTTAAATGGTGACGTATGTGGCCATCGGCCAATTGTGTCTCCTCGTGCGCAATATGAGTATGAATCTACTTATTCGGATGATCATTCTGGTTCAGGAGTTTTCGATGATTATGGGCCTGGGAAAATGAAGTTTCTATGCAGCTTTGGTGGGAAAATATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTAGGAGGACAGACTCACATGATATCTATCCGAAAGGATATCTCATGGGAAGCGCTTGTGAAGAAGACCTCGAGTATTTGCAACCAGCTCCACACAATCAAATATCAACTTCCAGGGGAGGATCTCGATGCTCTAATATCTGTCTCCTCTGACGAGGATCTTCAAAATATGATAGAGGAATACTATGGGCTTGAAAGGCATGAAAGTTCTCAGAGACACAGAATTTTTTTAGTTCCTTTGGGTGATTCTGAAGAGACTTCTTCATTTGAAGCAAGCAGCATTCAGCAGAGTGATCCTGGTTACCAATATGTTGTTGCCGTGAATGGCATAGCAGACCCTATTCATGGAAAAAGCATCGGAGGGCAGTGTTTGACAAATGAGGCAAGTCAATTGGATACAAGTTTGAATCTCGCCCCTTCTCCGAAATCCCCTTATCCTTTGGATGCCAAAGGTGGTGGTAATGCTGTAAATACAAATGGAATGTTTAATGATTCCCTGAATCTTCACATATCCCACATTCAATCTCCACTGATATCCCCTATTCGAATTGAGGGAAGAGGTTCAAGCATTGGTTATACACAGTTGCTTGCTAATAATTCGTGCCAAGGAAGTACTGAGAGCAACACATCCTTTGTTACAGCTCAGCCACAACCCGAGAATTCCAGTATAAGCACTGCTGATAGTAGATACACTCAACAAGTACCTTTGACTTTGTTAAGTAACAGTCTCCTTAATCAACACAATGATGTTGGTAAGCCAGAGAAGCTCTATGGACAGCATATTAGCAACTACAATCCGGACAAGGAATCTGCGACTCCTTTATATGTTAATCCAAGTGACGGTTACAGTGATGAACTTTATGGTAAAAGGCCCTTGCATAAGGAAAGAATATCCTACTCTGGGAATCCTCCTTTACGTTCGGATGACCCAATCTGTCAACATGCTGAATCTGATGTTACTATGTTCTCCCCTTTTGGAATGCCTCATGCCTTTTCTGATTCGCAGTTGCATGAGAGTGGAACACGATCTGGACACTGCTCACAAGAAGAAACTGGCCTATCTTTCCCCTTGAACCAGACAAGGGCTCAATCATCTTCAATGTTAATCTCTAGTGTCTCACAAAGGAACCTTCTGGAGATACATAATGATTCCATTCTCCTTTATCCTCAAATACAAAGTAAGATAACAAATAATATTGATTCATCTGAATTGCACAGAAGGCATGATGTTGCATCCTCGTCTCCGTATTCAGAATCAGCAGGAATGAATGATCCCATTCATAGTGGTAGCATTTTCATTGAAAAAAAGTACCCTGTTGCTCAAACTTATCTAAGTGGGTCTAGCTTTGTAGTGAAGCATGCTGAGGAGAATTCTTTGACTTCAGAAATGATTAAGAGAATTGAAGAGAAGAATCCTACTGACACAAAGGATAGCAAGATTTATGAGGACAAAACATCCTCCGATCATAGGGTTCATATCACTGAATTGAATCTTTTGGACTCTTTCCCTTGTACTAATTTGAATGCCAAGGTTAATATGCAAAAGGATCGGGAGCTACCTCTAAAGGATAGGGTTGCTGTATCATTAGGCGCGACGGGAGTCTGCGCAGATAATCATGCGGACAAAATCCCTTATAATCTTCTTGTCATGAGCCAAAAGACTAGTGATGGTAAGAAATGTGCTGTGACCGAAGGTTTGAATGGTGAGCAAGGTGCTGATTTTTCATTGACAAGAAACTCTGAGTTCAATGGTTCGACTTTCAAATGTGGAGAAACTTCTAGTGACAAAAATTCTCGTGGTGAGATGTTTGAACTGCTCATTGACTTAGATCCTTATAAAGCTTCACAAGTTCACCCTTCTGTAAATCTGAAGGGTGCAGATCTTCATGAAAATCGAACTTCTTTTAACAAAATTCCTTCGTTTATTGATCATGACTTGATAACCAGTCCAGACCAGATTGCTAATCAGGTTACCAGTGGCCATTTTGCTGAAAAGTCAAAAGCTGGCGATGTCAAGTCTGAACAATCAAGAAGATCAGAAAAGCACAATGATGTAAATCAAGCAGAGCCATTTTCTGCAGTAGAAGACATGATTAGTGTCGTTCGTCCAAACATTGATTCTTCATTGACAATCACCCCACAGATCGTGGATAAAAATGGAAGTCATGTTGTATCCTTGTCTCCTACAGAGGAAGGGAGCATCATCCCAGAGTCTGAACCTGAGGATTTTAAAGACGATGAATCAGACAGGAATGAATTCCTCACTGATGCAATGATAGCAGAAATGGAAGCAAGCATCTATGGTTTGCAGATAATAAGGAATGCGGATCTTGAAGAACTTCAGGAGTTAGGATCTGGTACTTATGGAACGGTTTATCACGGAAAATGGCGGGGATCAGACGTTGCTATAAAGAGAATTAAAAAGAGCTGCTTTGCAGGGAGATATTCAGAGCAAGAAAGATTGACAAAAGACTTTTGGAGAGAGGCACAAATCCTTTCAAATCTTCACCATCCTAACGTGGTTGCGTTTTATGGGATAGTACCAGATGGATCTGGAGGAACCTTGGCAACTGTAACTGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTCATCAAGAAAGATAGATTACTAGATCATCGTAAAAAGCTAACAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCATTCAAAAAATATTGTCCATTTTGATTTGAAGTGTGACAATTTGCTAGTCAATCTAAGGGATCCACACCGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCCGGTGGTGTGCGCGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAGCAGCAGCAGGGTTTCTGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGATATTGACTGGGGAGGAACCTTATGCCGATATGCATTGTGGCGCCATTATTGGGGGGATAGTAAAGAACACTCTTCGACCACCTATTCCGGAACATTGTGATACCGAATGGAGGAAGCTCATGGAAGAGTGTTGGTCACGTAATCCAGAAAGCCGACCGTCATTCACAGAGATAACACGCAGGTTGCGGGCTATGTTTATGACCCTTCAAGCAAAGGGATTGTCAGTTAAGGCCTAG 3777 0.4162 MALNKARNLLGTNTRKDHSLLPPFSNATGQGVHNDISVWEEEEFYVPFGNNGIASRRVSASPERYWKHEDRFGLSRENGHVKYEGLTKILGLRRMESESSEISDFISSIKEPTQEMENGISKSNKEAGDSHSSRKVIGELNGDVCGHRPIVSPRAQYEYESTYSDDHSGSGVFDDYGPGKMKFLCSFGGKILPRPSDGKLRYVGGQTHMISIRKDISWEALVKKTSSICNQLHTIKYQLPGEDLDALISVSSDEDLQNMIEEYYGLERHESSQRHRIFLVPLGDSEETSSFEASSIQQSDPGYQYVVAVNGIADPIHGKSIGGQCLTNEASQLDTSLNLAPSPKSPYPLDAKGGGNAVNTNGMFNDSLNLHISHIQSPLISPIRIEGRGSSIGYTQLLANNSCQGSTESNTSFVTAQPQPENSSISTADSRYTQQVPLTLLSNSLLNQHNDVGKPEKLYGQHISNYNPDKESATPLYVNPSDGYSDELYGKRPLHKERISYSGNPPLRSDDPICQHAESDVTMFSPFGMPHAFSDSQLHESGTRSGHCSQEETGLSFPLNQTRAQSSSMLISSVSQRNLLEIHNDSILLYPQIQSKITNNIDSSELHRRHDVASSSPYSESAGMNDPIHSGSIFIEKKYPVAQTYLSGSSFVVKHAEENSLTSEMIKRIEEKNPTDTKDSKIYEDKTSSDHRVHITELNLLDSFPCTNLNAKVNMQKDRELPLKDRVAVSLGATGVCADNHADKIPYNLLVMSQKTSDGKKCAVTEGLNGEQGADFSLTRNSEFNGSTFKCGETSSDKNSRGEMFELLIDLDPYKASQVHPSVNLKGADLHENRTSFNKIPSFIDHDLITSPDQIANQVTSGHFAEKSKAGDVKSEQSRRSEKHNDVNQAEPFSAVEDMISVVRPNIDSSLTITPQIVDKNGSHVVSLSPTEEGSIIPESEPEDFKDDESDRNEFLTDAMIAEMEASIYGLQIIRNADLEELQELGSGTYGTVYHGKWRGSDVAIKRIKKSCFAGRYSEQERLTKDFWREAQILSNLHHPNVVAFYGIVPDGSGGTLATVTEYMVNGSLRHVLIKKDRLLDHRKKLTIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPHRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPEHCDTEWRKLMEECWSRNPESRPSFTEITRRLRAMFMTLQAKGLSVKA 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0108 1258 MobiDBLite consensus disorder prediction 405 428 - -
Lal19g0108 1258 MobiDBLite consensus disorder prediction 867 887 - -
Lal19g0108 1258 CDD PB1_UP2 184 279 - -
Lal19g0108 1258 Gene3D - 199 281 - -
Lal19g0108 1258 MobiDBLite consensus disorder prediction 927 950 - -
Lal19g0108 1258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1104 1116 IPR008271 GO:0004672|GO:0006468
Lal19g0108 1258 ProSitePatterns Protein kinases ATP-binding region signature. 985 1010 IPR017441 GO:0005524
Lal19g0108 1258 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 114 1254 - -
Lal19g0108 1258 ProSiteProfiles Protein kinase domain profile. 979 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0108 1258 Pfam PB1 domain 197 281 IPR000270 GO:0005515
Lal19g0108 1258 PANTHER SERINE-THREONINE PROTEIN KINASE 114 1254 - -
Lal19g0108 1258 SUPERFAMILY Protein kinase-like (PK-like) 967 1241 IPR011009 -
Lal19g0108 1258 SMART PB1_new 195 282 IPR000270 GO:0005515
Lal19g0108 1258 MobiDBLite consensus disorder prediction 862 892 - -
Lal19g0108 1258 SMART serkin_6 979 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0108 1258 MobiDBLite consensus disorder prediction 113 133 - -
Lal19g0108 1258 Gene3D Transferase(Phosphotransferase) domain 1 1067 1255 - -
Lal19g0108 1258 MobiDBLite consensus disorder prediction 536 555 - -
Lal19g0108 1258 CDD STKc_MAP3K-like 985 1242 - -
Lal19g0108 1258 PRINTS Tyrosine kinase catalytic domain signature 1061 1074 IPR001245 GO:0004672|GO:0006468
Lal19g0108 1258 PRINTS Tyrosine kinase catalytic domain signature 1098 1116 IPR001245 GO:0004672|GO:0006468
Lal19g0108 1258 PRINTS Tyrosine kinase catalytic domain signature 1169 1191 IPR001245 GO:0004672|GO:0006468
Lal19g0108 1258 PRINTS Tyrosine kinase catalytic domain signature 1213 1235 IPR001245 GO:0004672|GO:0006468
Lal19g0108 1258 SUPERFAMILY CAD & PB1 domains 196 286 - -
Lal19g0108 1258 MobiDBLite consensus disorder prediction 532 555 - -
Lal19g0108 1258 Pfam Protein tyrosine and serine/threonine kinase 981 1242 IPR001245 GO:0004672|GO:0006468
Lal19g0108 1258 Gene3D Phosphorylase Kinase; domain 1 972 1066 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0108 Lal-Chr19 813811 822154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0108 179 312 MAP Kinase Kinase Kinase AT1G16270 56.716 4.44e-38 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal19g0108 PK_Tyr_Ser-Thr 1.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0108 - - gmx:100790135 1407.89