Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0080 ATGGGTTTCCTAAGTAATACCAATTATTACTTACCCATAACTTTTCTCATATTTTTCACATTTTTCTTGTGTTCAAATTCTTCAAGTATTGATGCTATTACATCAACCAGATTCATAACAGAAAATGATACAATAAGTTCAAACAACACTAACTTGAAGCTAGGGTTCTTCAGCCCAACAAATTCTACCAATCGATATCTAGCAATCTGGTATCTTTCTCAATCCTATGTTATATGGATAGCAAATAGAGATCAACCACTTAAAGATTCATCTGGGGTTGCAAAAATTCACAAAGATGGCAATCTTGTTATATTGAATGGACAAAACATTATCATATGGTCTTCTAATGTTTCAACTAACTTAACTAATTCAATTGTTCAGCTTCATGATTCAGGAAATCTTGTTCTTTATGATGTTATGTCAGGTCAACAATTATGGGACAGTTTCTCACATCCTACTGATGCAGCAGTTCCAACAATGAGAGTAGCTTCAAATCCTTATACAGGTAAGAAAATCGAATACGTTTCGAGAAAAAGTGATTCTGATGTTTCTAGCGGATATTTTACGGTTAGTCTTGAAAGATTGGATACCCCAGAAGTGTTTTTTTGGTATAATAAAACAAAGCCTTATTGGAGGACTGGACCTTGGAATGGAAGGTTCTTTCTTGGGACACCAAGGTTAACAACTGAATATTTATATGGTTGGAGTTTTGAACATGATACTGATGGAACTATTTATGTAACTTATAGTGTTGCAGATCCTAATGATTTTGGAATACTAAGCATTGTTCCAAGTGGTACACTTAAATTGGTAAGGATTTTAAACAAAGTTGAGTATGTGAATCTTGAAGTGGATCAAAATGAATGTGATTTTTATGGTGCATGTGGTCCATTTGGAAGCTGTGATAATTCTACTATACCAATTTGTAGTTGCTTTAAGGGGTTTGAGCCAAAGAATTCAGAGGAATGGACTATGAAAAATTGGACTAGTGGGTGTGTGAGAAATGTGCCATTGCAGTGTAGCAATTTGAGTAATGGAAGTGTTGTAGAACAAGATGGGTTTTTGGTGTATCATAATATGAAAGTTCCTGATTTATTAGAAAAGTTAGGTGGTGATCAAAATAAGTGCAGAGAATATTGCTTAGCCAATTGTTCTTGTTTGGCTTATGCATATGATTCTTATATTGGTTGCATGTATTGGAGCAAAGACTTAATTGACTTACAACAATTTCCATATGGAGGAGTTGATCTCTACATTCGTACCCCCTCTTCACTACTCAACTGCGATGGGGAGCCTCCAACCACTTGGGAGTTCCATTGTTACCGGGGTACAGATAAAAAGGGAAGAGGAAACAAGGCATTAATAGTTGGTGCTATTGCTGGGGCAATAGGAATAGTTACCTTAGTGTTGTGTGCATATATTTGGTGGAAGAAATGGACTGCTAAACAAACAGATACAAGAAGTCAGACTCAAAATGTAAGTAGTGGAGACCAAAAACAAACTAAACTGGAAGAGCTACCACTATTTGAATTTGAACAGCTTGCAACTGCTACAAATGATTTTCACTTGGCTAGTGTGCTTGGGAAGGGAGGTTTTGGTCCTGTATACAAGGGAAAATTGGAAAATGGGCAAGAAATTGCTGTTAAAAGACTTGCAAAAGCATCCACACAAGGTTTAGAAGAATTCATGAATGAAGTGGTAGTGATTTCGAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGATGTTGTATTGAAGGAGATGAACAAATGTTGGTCTATGAGTTCATGCCAAATAAAAGTTTGGATGCATTTATCTTTGATCCACTTCAAAGGAAGGATTTAGATTGGAAAAAGCGGTTTAACATAATTGAAGGAATAGCCCGAGGAATACTTTATCTTCACAGAGATTCGAGATTAAGAATTATACATAGAGATCTCAAGGCAAGCAATATCTTACTCGACGATCAGATGAATCCAAAAATATCAGATTTTGGTTTGGCTAGGATTTTTAAAGGTGGTGAAGATTATGAAGTTAATACCAAAAGAGTTGTTGGAACATATGGTTATATGCCACCTGAATATGCAATGGAGGGAATATTTTCAGAGAAATCAGATGTCTATAGTTTTGGAGTTTTGTTATTGGAGATTGTTACTGGAAGAAAAAACACTAGCTTTTATAATGAGGATTCACTTAGCCTTGTTGGATTTGCATGGAAACTATGGAATGAAGAAAGGATTGCATCAATAATAGATCCAGAGATATATGATATATGCTTTGAGAATAGTATCTTGAGGTGCATACACATAGGACTTTTATGTGTTCAAGAACTTACAAAAGAAAGACCTGCTATATCTACAGTAGTTTTGATGCTAATTAGTGAAATTACACATCTTCCTCCTCCAACAAAGGTAGCATTTGTTCATAAAGAAAGTTTACCATGTTCAACTTCCTCTCAAAAAAGTCAATCTGTCTCAAATAACAATGTAACTCTTAGTGAAGTTGAAGGCAGGTAA 2517 0.3524 MGFLSNTNYYLPITFLIFFTFFLCSNSSSIDAITSTRFITENDTISSNNTNLKLGFFSPTNSTNRYLAIWYLSQSYVIWIANRDQPLKDSSGVAKIHKDGNLVILNGQNIIIWSSNVSTNLTNSIVQLHDSGNLVLYDVMSGQQLWDSFSHPTDAAVPTMRVASNPYTGKKIEYVSRKSDSDVSSGYFTVSLERLDTPEVFFWYNKTKPYWRTGPWNGRFFLGTPRLTTEYLYGWSFEHDTDGTIYVTYSVADPNDFGILSIVPSGTLKLVRILNKVEYVNLEVDQNECDFYGACGPFGSCDNSTIPICSCFKGFEPKNSEEWTMKNWTSGCVRNVPLQCSNLSNGSVVEQDGFLVYHNMKVPDLLEKLGGDQNKCREYCLANCSCLAYAYDSYIGCMYWSKDLIDLQQFPYGGVDLYIRTPSSLLNCDGEPPTTWEFHCYRGTDKKGRGNKALIVGAIAGAIGIVTLVLCAYIWWKKWTAKQTDTRSQTQNVSSGDQKQTKLEELPLFEFEQLATATNDFHLASVLGKGGFGPVYKGKLENGQEIAVKRLAKASTQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEQMLVYEFMPNKSLDAFIFDPLQRKDLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDQMNPKISDFGLARIFKGGEDYEVNTKRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVTGRKNTSFYNEDSLSLVGFAWKLWNEERIASIIDPEIYDICFENSILRCIHIGLLCVQELTKERPAISTVVLMLISEITHLPPPTKVAFVHKESLPCSTSSQKSQSVSNNNVTLSEVEGR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0080 838 SMART blect_4 36 152 IPR001480 -
Lal19g0080 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 218 IPR036426 -
Lal19g0080 838 CDD STKc_IRAK 527 792 - -
Lal19g0080 838 MobiDBLite consensus disorder prediction 816 838 - -
Lal19g0080 838 Pfam D-mannose binding lectin 77 178 IPR001480 -
Lal19g0080 838 PIRSF SRK 4 838 IPR024171 GO:0004674
Lal19g0080 838 ProSiteProfiles Protein kinase domain profile. 521 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0080 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lal19g0080 838 SUPERFAMILY Protein kinase-like (PK-like) 506 820 IPR011009 -
Lal19g0080 838 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 836 - -
Lal19g0080 838 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Lal19g0080 838 Pfam Protein tyrosine and serine/threonine kinase 522 787 IPR001245 GO:0004672|GO:0006468
Lal19g0080 838 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 836 - -
Lal19g0080 838 CDD PAN_AP_plant 336 422 - -
Lal19g0080 838 SMART ntp_6 349 421 IPR003609 -
Lal19g0080 838 Gene3D Phosphorylase Kinase; domain 1 495 596 - -
Lal19g0080 838 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Lal19g0080 838 CDD B_lectin 36 152 IPR001480 -
Lal19g0080 838 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Lal19g0080 838 Gene3D - 26 150 IPR036426 -
Lal19g0080 838 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Lal19g0080 838 SMART serkin_6 521 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0080 838 Pfam PAN-like domain 350 407 IPR003609 -
Lal19g0080 838 Gene3D Transferase(Phosphotransferase) domain 1 597 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0080 Lal-Chr19 618508 624205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0080 446 833 Receptor kinase-like Gene Family AT4G05200 51.523 1.45e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal19g0080 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0080 - - gmx:100786846 1197.57