Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0076 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGCTACTGGTGGCAAGAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCAGCTAACACTAAGCTTTCAAGCAACAAAACAGTTAGGAGGATCCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCATTGAGGTTGGATACTGGAAATTTCTCGTGGGGTAGTGAAGCTGTAACTCGCAAGACTCGTTTACTAGATGTTGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACTCTCGTCAAGGGTGCTATTGTGCAAGTTGATGCTGCTCCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAGTTGGTAGGAAGAAGAAAGCAGCTGCTAAGAAGGACACCACAGAGGAAGGTGAAGCCACTGCAGAAGAGGCCAAGAAAAGTAATCATCTGCAGCGCAAAATTGAGCAGCGACAGAAGGATCGTGTTCTTGATGCTCACATTGAAGAGCAATTTGGTGGTGGGAGATTGCTTGCTTCCATTTCATCTCGACCCGGTCAATGTGGCAGAGCTGATGGCTACATTCTAGAAGGTAAGGAGCTGGAATTTTATGTGAAGAAACTCCAGAAGAAGAAGGGAAAAGGTGCTGCTGCTTGA 657 0.4658 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVEVGRKKKAAAKKDTTEEGEATAEEAKKSNHLQRKIEQRQKDRVLDAHIEEQFGGGRLLASISSRPGQCGRADGYILEGKELEFYVKKLQKKKGKGAAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0076 218 MobiDBLite consensus disorder prediction 1 40 - -
Lal19g0076 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
Lal19g0076 218 MobiDBLite consensus disorder prediction 129 153 - -
Lal19g0076 218 Gene3D - 26 212 - -
Lal19g0076 218 MobiDBLite consensus disorder prediction 11 26 - -
Lal19g0076 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Lal19g0076 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lal19g0076 218 CDD Ribosomal_S8e_like 5 196 - -
Lal19g0076 218 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Lal19g0076 218 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lal19g0076 218 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0076 Lal-Chr19 592797 595547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0076 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 82.439 1.98e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0076 K02995 - gmx:100500112 355.14