Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0067 ATGGATTTGGAAGCTAGAGCAGAAACTGTTGATGAAAGTTCTACTGAGAAAATATCAGCAATAGTAGTAGTATGTGAAGAAAGTTCAACTAGGGAACCATTTGTAGGCATGGAATTTGAGTCTGAAGATGATGCCAAGTATTTTTATGGCGAATATTCGAGGCGTGAAGGGTTCAGTATGCGCCTTGATCGCTGTCATCGTTCCGATGTTGACAACAGAATCATATCTCGTCGCCTTTCGTGTAACAAGCAAGGTTTTAATATGAGAGGCAAAAATGGAACCCAACCTGTTAAGAAACCGAGGGTTAGCATAAGAGAAGGGTGTGAGGCAATGTTGTGGGTTAAAGAGAACAAATGTGGGAAGTGGATTGTTACTAAATTTGTAAAAGAACATAATCATCCACTATATGGTTCTGCTGCTGCCTCTCCTTCCTATAAATTATTGGAATCGAAGGACAGGAAGATTCATCAACTCGAAAAGGAACTTGAGCGTCGAGATCAACAATGTCAACAATATCGCAGACTTTTACTTTCCCTCCTTGAAACTGTTGATGACCAAACAGAATTCTTCTCAGGAAAAGTTGAACTTATTGTTAACAATGTAAAACAACTTGAGAACAAATTGCAAAAACCTTTGGACTCTTAA 645 0.3876 MDLEARAETVDESSTEKISAIVVVCEESSTREPFVGMEFESEDDAKYFYGEYSRREGFSMRLDRCHRSDVDNRIISRRLSCNKQGFNMRGKNGTQPVKKPRVSIREGCEAMLWVKENKCGKWIVTKFVKEHNHPLYGSAAASPSYKLLESKDRKIHQLEKELERRDQQCQQYRRLLLSLLETVDDQTEFFSGKVELIVNNVKQLENKLQKPLDS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0067 214 Coils Coil 148 175 - -
Lal19g0067 214 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 211 - -
Lal19g0067 214 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Lal19g0067 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 2 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0067 Lal-Chr19 525055 529228 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal19g0067 FAR1 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0067 - - pvu:PHAVU_010G032600g 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g1508 9 17350074 17355876 Lal19g0067 19 525055 529228 PCT
Lal19g0067 19 525055 529228 Lal9g1508 9 17350074 17355876 PCT