Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0036 ATGTCCTTCAATCAATCAAACTCGGATAATAAGACACAACCTGTGTATCCAAAATCCGGCCGATCCGCCACCTTCAATCATCACCGCCCTTCCTCGCCCTCCTACGTCAAGCCCGGTGCCGGTGATGGTGCTGCTGCTGCTGGCCCCGCCTCCTCAATTTCATCTACCCGGAGTTTTAACAAGAAATCTAATAATGCACAAGGTGGGCAATCTAGGGCAAACCCTACCCCAGTGAATTCAACAGAGGCTAATTATGCTCCGGCTGCCGGTACCATACAGAATGGATCCCACGTACAACCACAATTATCTGGAGCCCCTGGTACGTCAGTTACAACCAAATCATCTGAATCATCAGCTGCACAGAGGAGCAGTGCAGCCGTTCCAAAAGCCTCAACTTCTCAACCACCACCCCCCATGAGTTCTGATGCAGCCGCCCCTACAACCCCTGCTAAGGGAGATGCATCCAAGACATTCCCTTTCCAATTTGGATCCATTAGTCCCGGCTTTATGAATGGGATGGCAATTCCAGCTCGCACTAGCTCAGCTCCTCCTAATATAGATGAGCAGAAGCATGATCAGGCTCATCACGACTCTTTTAGATCTAGGCCTTCAGGGCCGACACCTCCTGTTCCGAAGCAGCAGCAACCACCTAGGAAAGATGCAGGTGTCACCTATCAATCTAATGCTGGGGAGACTCATATAGGAACTAAGGGAAGGAAAGAACCTCAGGTATCAGCTTCGATCCCAGCAGGCCTGATTCAGAAGCCTTCTGTTGTTTCTGTAACTGGGCTTTCAATGGCAATGCCATATCATCACTCCCAGGCATCTTTACAGTTTGGTGGTCCTAATCCACATATTCAATCTCAGGGTATTTCACCAGCATCCCTCCAGATGCCTATGCCGATACCTATACCATTTGGAAATGCTGCCCATGTGCAACAACAGGGTTTTGTGCCCGGTCTTCGATCTCATCCAATGCATCATCCAGGGATAATGCATCAAGGCCAGAACATGAGTTTTACTCCTCCAATGGGTCATCAGCTGTCCCATCAGTTAGGCATGGGCATTGGCATGAGCCCCCAATATCCTCAGCAGCAAGGGGGAAAGTTTGCCACTCCTCGAAAAACTACTACTGTGAAGATCACTCATCCCGAGACACACGAAGAGCTGAGGCTTGATAAAAAAACAGATGCTTATTCAGATGGTGGGACATCAGGTGTCAGGTCGCATCCTAACATGCCTTCTCAATCTCAGCCTGTTCAATCTCTTGCAGCTTCTCATCCTATGAACTATTATTCAAGATCCTTTAATACAAGTTCTCACTATAATCCACCTCCTACTTCTCTTCCGCCAACAAGCAGCCTGATAACTCCAAATTCTCAACAACCGGGAAATAATTATCTGCTGAACCATGGTTCAGAAAATGCTGGTTTCATGAATTCATCATCACTCGGTTCTCTGAAAGCTAGCACTCCTATTACTGGCATTGTTGAAGCACATAATTCAGAAAGTTCCCACAATGTGCCTAATGCGTCATCATCAGCTCCATTTGGAGCAACTTCTGTAACTATTAAGCCAAGTGGCCCGTCTGCTGATGTGGACTCATCATTGCCCAATTCCAGTAATTCTGGTGTTCAAAATAGAGAGTTTAGTTCAACAGCGTCTTCTGATACTAGCTCCTTTGTGCTACAAAAAGGTTCTGAAACTGGCACAGATAACTCCTCACTGCAGTCTAAATTGGCCAGCAACTCCTCAGTTTTGTGTTCACTGCCAAAACAATCTTCTGCATCTGTTGCGGTATCTGCTGAGAAGCTTACAGCCACTCCCTTGACGCTTCCTTCATCAACTCCTAGTGCGGATTCTGTCTTGGTTGTGTCTAATAATGATGCCCAAATGAAGGTATCTCTTAGTAGTTCTAACTCTCTGAAGGATAATCATAATAACCTATCGAAGAAAGGTCAATTAGAACAGGTTTCTGTGAAATCCCCTACAGAGGCTAATGTATCTTCTCAGGCTGTTGACATTGGTAAATCTGATACTGGAGTTTCCGAACCTGCAGGGACTCAAATAAACTATTCTGTGGCAGTTAACCCTGAAGCTCTTCAATCATCTCCTGACACAACATCAGTTACCAGCAGGAGCATTCCTAGTGCTGTTGAAGTGAAGACCAACTGTTCTGCCGATTTTTTTGCTCGTGTTTCAGTGGAAAGATATGGAGCACAAGGTGCTGATAGTTTGAACAATCATAAGCATGATAAGATAGATGATTCATCAGAAGAACAAGATGCTGCAACGGTAAGCATTGAGCTGATTAACTTGAAGACTGTACAGCAAAAACAGGATGATTCTTCAAGTTGCAGTGCAGAATTTACCAGCACTGACCCGCTGTCTGTGGATATTCTAGAAAAAACTTTAACACATGTCAAGGATTGTTCAGATAATGCTGCCATTGACTCGATGTCTCTTCCAGTGTCAGGTAACAAGAATACACAAACTTCAGAAGCAAATAAGGTGAATAATACATCTAAAGCAAAGAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGATGCTGCCGGATCAATTTCTGATCTTTATAATGCATACACGGGACCTGAGGGAAAAAAAGAAGCTGTACTGAATTCAGAGACTACTGAAAATGATTCTACTTCTGGAAGTTTGAAGCAGTTGCCGACTGATGTTGCTCACCCGGGTGCTGTAGCAACCGAGAAATGTGGAGAGATTAAAGCTGAACCTGATGACTGGGAGGATGCAGCTGACATGTCTACACCCAAACTTCAAGCTGTTGATAAATCATACCAGGTTAGCTGTGAAAGTGGAGGTACAGCCAAAAAGTACTCTCGAGATTTCCTTTTGAAATTCTCTGAGCAATGTACTGATCTTCCTGAAGGTTTTGAAATCTCGGCAGACTTTGTTGAGGCTTTGATGAGCGCTAATATTAGGAGTGTTCATGTTTTTGAGCGTGATTCACATCCTAATCCCCGAAGAAATGTAGATATGCCAGGTGGAATGTCTCGGATGGATCGTCGTGGAAGTGGTATGATTGAGGATAACAGATGGAATAAAGTTTCTGGTGCTTTTCATTCTGGACGTGGTTTGGATGGTATTGGAGGTAATGCTGGATTTCGAGCTGGCCAAGGGGGTAATTTTGGTGTTTTAAGGAATCCTCGATCACATATACCCTTACAATATGCTGGGTCAGTTGAATTGATGGGAAATCAGGGTGGAATGCAAAGAAGTCCTGATGGTGAAAGGTGGCAGCGTTCTGGTAACTTCCAGCACAGGGGTTTAATTCTTTCACCTGCAACTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAATATACCAGATGCGGAACAGGCAAAGCAGAGGCAATTGAAAGCTATATTGAACAAACTAACCCCTCAGAATTTTGAGAGGCTTTTTGAACAGGTAAAAGCAGTTAATATTGATAATGCAGTCACCCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTTACGGAGCCTACCTTCTGTGAAATGTACGCCAACTTCTGTTCACATCTGGCTTCTGAGTTGCCTGATTTAAGTGTTGACAATGAAAAGATAACATTTAAGAGATTATTATTAAACAAATGCCAAGAGGAATTCGAGAGGGGTGAGAAAGAACAAGAGGAAGCCAATAAGGCTGATGAGGGAGAGGTAAAACAGTCGGATGAAGAAAGGGAGCAGAGAAGAGTCAAGGCAAGAAGGCGTATGTTGGGAAACATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACCGAGAGGATAATGCACGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAGGAAGACATTGAAGCATTGTGCAAGCTGATGAGTACAATTGGGGAGATGATTGACCACCCCAAAGCCAAGATTCATATTGACGCGTATTTTGAAAGAATGAAGGTGTTATCAAACAATATGAACTTATCTTCGAGGGTAAGGTTCATGTTGAAGGATTCAATTGATTTGAGAAAGAATAAATGGCAAGAAAGGAGGAAAGTTGAAGGTCCGAAGAAGATCGATGAGGTACACAGAGATGCTGTGCAAGAGAGGCAAGCTCAAGCTGGTAGGATGGGTCGAGGTCCGGGCAACAATCCTTCTGCAAGAAGGAACCCCATGGATTTTGGTCCAAGAGGGTCATCAATGTTGTCTTCTCCTACTGCTCAGATGGGTGGACTGCGTGGGCTGCCTACTCAAGTTCGGGGGTATGGTTCTCAGGATCCTCGTTTTCAGGAAAGGCAATCTTATGAGGCTAGGACCTTGTCAGTTCCTTTGCCTCAAAGAACCTTAGCCAACAATTCTTTAACCTTGGGACCCCAAGGTGGCCTTGCTAGGGGAATGTCAATTAGAGGATCAACAGCAATTTCGAGTTCATCAAATTCTGATGGATTTCCTCTGCCTGGAGACTCTCACAGAATGACTAGTGGTCTCAATAATTATAGCAACTTACCAGAGAGCGCACCATACAATTCAAGGGAGGATCTTGCATCAAGACACATGGATAGATTTTCCGGTCCAGTTGGTTATGATCAATCAAGTGCTTATGAGCATAATATTAACTATGGTAATAGAGACTTGAGGAATGGAGATCGGAATCTCGACAGACCTACTTTAATTTCACCTACTGCTCAATTGTACGGTTCAACAGTCTCCCACAATGTTCCTTCAGAGAAGGTATGGCCAGAAGAGCGACTGCAGGACATGTCCATGTCAACAATCAGAGAATATTACAGTGCTAGAGATGACAAGGAAGTTGCATTGTGTATCAAAGATTTGAACTCTCCAAGCTTTCATCCTTCTATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAAAGAGATGTTTTGGCTAAACTGCTAGTCAACCTTGTGAAATATCAGGATGGAACCTTGAGTCAGGTCCATCTCGTCAAAGGGTTTGAATCTGTTCTCAATACGTTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCCGAGTTTCTTGGACGAATTTTCGCGAGAGTTGTAACAGAGTGTGTAGTCACCTTGAATGAGATTGGGCAGCTAATACATGATGGTGGAGAGGAGGCAGGGAGTCTCTTAGAAGCTGGGCTTGCGGCCGATGTTCTAGGATGGACATTGGAGTCAATAAAAGTGGAGAAAGGGGAAGGTGTTCTTAGTGAGTTTCTTACAAGCTCTAACTTGCTGTTGGAAACTTTTAGGCCACCTAATCCCATTACCTCAAGGAAGTTAGAGAAATTTATTTAG 5355 0.442 MSFNQSNSDNKTQPVYPKSGRSATFNHHRPSSPSYVKPGAGDGAAAAGPASSISSTRSFNKKSNNAQGGQSRANPTPVNSTEANYAPAAGTIQNGSHVQPQLSGAPGTSVTTKSSESSAAQRSSAAVPKASTSQPPPPMSSDAAAPTTPAKGDASKTFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKHDQAHHDSFRSRPSGPTPPVPKQQQPPRKDAGVTYQSNAGETHIGTKGRKEPQVSASIPAGLIQKPSVVSVTGLSMAMPYHHSQASLQFGGPNPHIQSQGISPASLQMPMPIPIPFGNAAHVQQQGFVPGLRSHPMHHPGIMHQGQNMSFTPPMGHQLSHQLGMGIGMSPQYPQQQGGKFATPRKTTTVKITHPETHEELRLDKKTDAYSDGGTSGVRSHPNMPSQSQPVQSLAASHPMNYYSRSFNTSSHYNPPPTSLPPTSSLITPNSQQPGNNYLLNHGSENAGFMNSSSLGSLKASTPITGIVEAHNSESSHNVPNASSSAPFGATSVTIKPSGPSADVDSSLPNSSNSGVQNREFSSTASSDTSSFVLQKGSETGTDNSSLQSKLASNSSVLCSLPKQSSASVAVSAEKLTATPLTLPSSTPSADSVLVVSNNDAQMKVSLSSSNSLKDNHNNLSKKGQLEQVSVKSPTEANVSSQAVDIGKSDTGVSEPAGTQINYSVAVNPEALQSSPDTTSVTSRSIPSAVEVKTNCSADFFARVSVERYGAQGADSLNNHKHDKIDDSSEEQDAATVSIELINLKTVQQKQDDSSSCSAEFTSTDPLSVDILEKTLTHVKDCSDNAAIDSMSLPVSGNKNTQTSEANKVNNTSKAKKKRKEILQKADAAGSISDLYNAYTGPEGKKEAVLNSETTENDSTSGSLKQLPTDVAHPGAVATEKCGEIKAEPDDWEDAADMSTPKLQAVDKSYQVSCESGGTAKKYSRDFLLKFSEQCTDLPEGFEISADFVEALMSANIRSVHVFERDSHPNPRRNVDMPGGMSRMDRRGSGMIEDNRWNKVSGAFHSGRGLDGIGGNAGFRAGQGGNFGVLRNPRSHIPLQYAGSVELMGNQGGMQRSPDGERWQRSGNFQHRGLILSPATPQTPLQMMHKAEKKYEVGNIPDAEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALTEPTFCEMYANFCSHLASELPDLSVDNEKITFKRLLLNKCQEEFERGEKEQEEANKADEGEVKQSDEEREQRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKIHIDAYFERMKVLSNNMNLSSRVRFMLKDSIDLRKNKWQERRKVEGPKKIDEVHRDAVQERQAQAGRMGRGPGNNPSARRNPMDFGPRGSSMLSSPTAQMGGLRGLPTQVRGYGSQDPRFQERQSYEARTLSVPLPQRTLANNSLTLGPQGGLARGMSIRGSTAISSSSNSDGFPLPGDSHRMTSGLNNYSNLPESAPYNSREDLASRHMDRFSGPVGYDQSSAYEHNINYGNRDLRNGDRNLDRPTLISPTAQLYGSTVSHNVPSEKVWPEERLQDMSMSTIREYYSARDDKEVALCIKDLNSPSFHPSMVSLWVTDSFERKDTERDVLAKLLVNLVKYQDGTLSQVHLVKGFESVLNTLEDAVNDAPRAAEFLGRIFARVVTECVVTLNEIGQLIHDGGEEAGSLLEAGLAADVLGWTLESIKVEKGEGVLSEFLTSSNLLLETFRPPNPITSRKLEKFI 1784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0036 1784 SUPERFAMILY ARM repeat 1133 1361 IPR016024 -
Lal19g0036 1784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 136 1774 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 393 473 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 49 130 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 171 224 - -
Lal19g0036 1784 Pfam MIF4G domain 1137 1359 IPR003890 GO:0003723|GO:0005515
Lal19g0036 1784 MobiDBLite consensus disorder prediction 818 839 - -
Lal19g0036 1784 Gene3D - 1590 1784 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 1 159 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 1 31 - -
Lal19g0036 1784 SUPERFAMILY ARM repeat 1592 1781 IPR016024 -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 1383 1422 - -
Lal19g0036 1784 Coils Coil 1219 1239 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 453 473 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 655 686 - -
Lal19g0036 1784 ProSiteProfiles MI domain profile. 1596 1720 IPR003891 -
Lal19g0036 1784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 136 1774 IPR045208 GO:0003743
Lal19g0036 1784 SMART ma3_7 1597 1711 IPR003891 -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 402 443 - -
Lal19g0036 1784 Gene3D - 1137 1372 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 879 898 - -
Lal19g0036 1784 SMART if4_15 1137 1359 IPR003890 GO:0003723|GO:0005515
Lal19g0036 1784 MobiDBLite consensus disorder prediction 818 851 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 1229 1253 - -
Lal19g0036 1784 Pfam MA3 domain 1601 1709 IPR003891 -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 501 577 - -
Lal19g0036 1784 MobiDBLite consensus disorder prediction 882 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0036 Lal-Chr19 283738 291929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0036 1 1783 Eukaryotic Initiation Factors Gene Family AT3G60240 45.330 0.0 1258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0036 K03260 - gmx:100796636 2083.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0036 19 283738 291929 Lal19g0036 19 283738 291929 ECH
Lal14g0137 14 1433830 1442884 Lal19g0036 19 283738 291929 LSH
Lal7g0056 7 528059 544392 Lal19g0036 19 283738 291929 LSH