Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0031 ATGGGTGGTTACACCTTGGCATATCCCCCGCGGTGCACGTTATCAACTAAGCGGTGGTGGGCTTCTAGATCTCAAATTCAGCCGCACACTCCTCCCACCAAACCTAACCCCACCCACCTCATCCCTCTTCTTTTATTATCATTATTATCATGCTCCTTTCCCCATTCACCACCACCACCTCCTCCAACAACATCAACCATTTTCTTATCCTTCACCACCCTTCTTATCCTTCACCACCTTTCTTATCCTTCACCACCATCTACCCCAATGGCCTCTTCCTCTTCCCCAACAGATCCATCTCCACCTTTTGCTCTCCCTCTCCTCCCCCCTCCTCCCTCCTCCTCCACCACCACCTCCCGCCGCCTCCCTCCGCCCTGCTGGTCCCCTGAAGAAACCGCCGCTCTTATTACCTCTTACCGTGACAAATGGTACTCCCTCGCCCGGAGCAATCTCAAGGCCACCCACTGGCAGGAGGTGGCTGACGCCGTCTCCGCCGCATGTCCTAACGTATCCCCTTCAAAGACCGCCGTACAGTGCCGTCACAAGATGGAGAAGCTTCGCAAGAGATATCGCGCTGAGATCCAGCGCGCTCGGAATCTTCCCGTCAAGAAATTCAACTCCTCGTGGCTCCATTTCAAACTCATGGATTCCATGGAAAAAGGTCCCTCGCCACCGAAACCTGATAACAACAACAACAACGACAACGCCGATTTTGTCGATGTTGACGATGAAATTGATGCTGAAGATGAAGAGGATCAGGATTTCATCCACGCCAATTCGCTCTACAAATTGCGCAGGAACGGAATTGGGAGTTCAGGCGGTGGTGACGGTGGAATTGGCGGTGGCGGTGGTGGTGGTAGCCGTAGAGTTGAAGGAGGGTTTCGGATTAGGATTCCTAGTGGTGTAAGTGTAGCGAAACCTGATTCGAGGTTTTATGGGAGATTTAATGATGAGAAACGGAACCCTAATTCAAGCTATGGTGGCAAAAGTGTGAAGGAAGGAAGTGCATTGGGGAAGAGAGAGAGGGACCCAGTGGAAGAGATGGTGAATGCAATTAAGGTTTTGGGAGATGGATTTGTGAGGACAGAGCAGTTGAAGATGGAAATGGCGAGAGAGATCGAAAGTATGAGGATGGATATGGAGATGAAGAGGACTGAGATGATATTGGAATCACAGCATAGGATTGTTGAGGCTTTCGCCAATGCCGTTTCCGAGAAGAACAAGAAAACTAAGAGGGTACCATCATCCCCTGAATCATAG 1260 0.5071 MGGYTLAYPPRCTLSTKRWWASRSQIQPHTPPTKPNPTHLIPLLLLSLLSCSFPHSPPPPPPTTSTIFLSFTTLLILHHLSYPSPPSTPMASSSSPTDPSPPFALPLLPPPPSSSTTTSRRLPPPCWSPEETAALITSYRDKWYSLARSNLKATHWQEVADAVSAACPNVSPSKTAVQCRHKMEKLRKRYRAEIQRARNLPVKKFNSSWLHFKLMDSMEKGPSPPKPDNNNNNDNADFVDVDDEIDAEDEEDQDFIHANSLYKLRRNGIGSSGGGDGGIGGGGGGGSRRVEGGFRIRIPSGVSVAKPDSRFYGRFNDEKRNPNSSYGGKSVKEGSALGKRERDPVEEMVNAIKVLGDGFVRTEQLKMEMAREIESMRMDMEMKRTEMILESQHRIVEAFANAVSEKNKKTKRVPSSPES 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0031 419 MobiDBLite consensus disorder prediction 271 292 - -
Lal19g0031 419 Pfam Myb/SANT-like DNA-binding domain 125 218 IPR044822 -
Lal19g0031 419 Gene3D - 127 192 - -
Lal19g0031 419 Coils Coil 180 200 - -
Lal19g0031 419 MobiDBLite consensus disorder prediction 89 118 - -
Lal19g0031 419 MobiDBLite consensus disorder prediction 86 126 - -
Lal19g0031 419 MobiDBLite consensus disorder prediction 307 342 - -
Lal19g0031 419 MobiDBLite consensus disorder prediction 216 238 - -
Lal19g0031 419 PANTHER TRANSCRIPTION FACTOR 92 415 - -
Lal19g0031 419 ProSiteProfiles Myb-like domain profile. 127 187 IPR001005 -
Lal19g0031 419 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 92 415 IPR044823 -
Lal19g0031 419 SMART 118neu2 134 223 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0031 Lal-Chr19 242321 243580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0031 80 218 Trihelix Transcription Factor Family AT3G14180 31.973 2.62e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal19g0031 Myb_DNA-bind_4 6.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0031 - - zju:107421767 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0031 19 242321 243580 Lal19g0031 19 242321 243580 ECH