Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0023 ATGGGTGAAAGCACTGCTGAAGAGAAATCATGGCATCTCTTATCCCTTGTGTTGAGAATTGGTCATCCTCTTTACCCTCAACAACTCTCTTCTCATTGCCATCTATTCTCCGCTTCTCCTTCTTTGATCCTTTCTCTCATCTCTCTTCCCAATTCTCCACTCTCTCTTTCCCCTCACGGTCTTCTTATTCCTTCTCCCTCCGTTCTTCTCTCCATTTCTAACTTCTTCTCTCTCACCGTCGATCGCCGTTTCAATAAGCGCAAGGGAGATCTGCTACTTGGAAGAGATCAAAAGAGATTATCACTTAGTAACCATCTTCAACACGTTTCCCTTCAGAATTATGCTCATACAGCAATGGATAAGGTTATCCCTACATTAACATTTGGATCGCTTACTATGCATTGGAGGGAAGCTGATAATGATGCCAGCACAAGCATGCTTCAAGGAGAGATTTCGAGGTCTGTTATTAGTCGTAGTTTGTTCCTGACTGGAAATGACTTCCCTTTTCGGAATGTGGGTAACCATGCTCTGCCGACTACTTTTCAAGATCCCTTTCTATGTGATGATGAGGCTCGTGTTAGTAGCAGTGGATTCGGGAAGAAAATGGATTACGTTGAAACATTTAGTCATGCATATTCTGAAGAAAATATTCATCCACTGGATCATGGTATTTGTGAAATTAATACTTCCAAAGATCCATTAAGAGAATCTAATGAAGAGGAAGATATGCAAGTCGAATGTGATTTAAAAGAAGGGCTAGTTGGCTCTGTAACAGAAAGAGAGAAGGAAGACATTAATGAGGTTGTCAATCTAGCAACTTGTGGAGAAGAACTAACATATGGTTTGGAACTGGAAAACATTACTTGCAAAGATCCAATAAGAGAATCTAATGAAGAGGAAGGTATACAAGTCAAATGTTGTTTAAAAGAAGGGCTAAGTGGCTCTGGAACAGAAAGAGAGAAGGGAGACACTACTCAGTTGGTCAATCTGGCAACTTGTCGAGAAAAACTAACATATGGGTTGGAACCGAAAAACTTAAGGCGTGCATTAAATTTTGACAAAGACGAGATACCGAGAAACATAGGGACTCAGTCTACCTGTAAAATAGCTCATCCCTCTTCAAAGAAGCATCTGAAATCTTCGACATTGAAGGGAGGACAGAGGAATGATTTACACCCTAAGTCACAAATTCTCACAAAGTCAGTAGCTTGCAATAAGTTTGATAATGACCCAAATGCTGATGAAAAGAAAAATGAACAAAATACAAGGCACAAACTAAAGCAAATCCGTAACGAAAACATGGCAGAAACTACCTCCATAAACCCTAAGGTTGAGAAAAAAGCATATCCATCTTTTGAACCTTTTACAATTGAGGAAGAAGAAGGTTCAGGTGGTTATGGAACTGTATACCGTGCTAGAAGAAAGAGTGACGGGAAAAGACTTGCAATAAAATGTCCACATGATAATGCACACAAAAACCACATAAATAATGAGCGGCTTATGCTTGAGCGTTTTGGGGGTAAAAACTTCATAATAAAGTTTGAAGATTCCTTCAAAAGTAGCAGTGGTGACTGCTTTGTTTTAGAACATGTTGAGCATGACAGACCTGAGGTTTTGAAAAAAGAAATCGATATAGTTCAACTTCAGTGGTATGGATATTGCATGTTTAGGGCCCTTGCATGCTTGCACAAAGAGGGAGTAGTTCACAGAGATGTCAAACCTGGAAACTTTCTTTTTTCTCGAAGGCTAAACAAGGGCTACCTTATTGATTTCAACCTTGCCATGGATTTAAAGCAGAAGTACAACATTGGAAGTAAATCCAAACCAAGCCTTGATGCATCCAATAATATTCATCTCCCTTCTGGTTCTGCCCCAGTGGTTCAAGACAAAAACCTTGTAGGAAGCAAGTCTATGCCGTCTAGTAAAAGGGAGGTAGCAGATTATAAGAGAAATTCTCAACTTAATAGGCAAGTAAAGCAAAAGGCTTATACTGGTTCTCAGAAAAATTGCCCTGATAAGGCTGGTGTCACTTTACTTAGAGCACAAGGAACAGATGGCTCGGGTATAACCTCTGCAAAAGATCTCACTAGCTCTAAGGCTGCTTCTGCAGAAAGGCTCAGGGAAATATTACCGTCCCAAGGAAGAAAGGAGCTCATAAGCTATGCATTGCAAAATTCTATGTCATCTGCAAAAAATAGTTCAATAAAAGGTCCTTCTTCTCAAAGAAAAAGGGTTACTGCTCCTTCAGGAAAGGCAGATGGCAAAATTGTTTATCTTACGCCCATGCCTCTACATTCGTCTGCTACTGCAGGGTTACTGAGAAGCAGAGGGGATGGAAGACAGAAAAGAGAAGGTTCATGTGTTGGAACTAAAGGATTTCGTGCTCCGGAGGTTTTGTTCAGGTCTCACTTTCAGGGACCCAAAGTTGATACTTGGTCAGCTGGAGTTACTTTACTCTACATGGTGATTGGGAAAAGTCCTTTCACAGGCGAACCCGAACAGAATATAAAAGAGATTGCTAAATTGCGGGGCTCTGAGGAGCTTTGGGAAGTGGCCAAGTTACATGACAGAGAATTATCTTTTCCATTGGAGTTATTTGATGATCGGTACTTGCAATCATGGGACATAAAAAGCTGGTGCAAGATTCAAACGAAGAGGCCAGAATTTTTTGAGCAAATCCCAAAATCATTATTTGATTTATTAGACAAGTGCCTAACAGTAAATCCAAGAAATAGGATTAGTGTTGAAGAAGTTCTAAGGCATGAATTCTTTGGCTCATGTCATGAGATAATGAGGAAGCAAAGGATGAATCGACGGGGTGAGGCTGCAGCTTCAGGAACCATCTGA 2847 0.4043 MGESTAEEKSWHLLSLVLRIGHPLYPQQLSSHCHLFSASPSLILSLISLPNSPLSLSPHGLLIPSPSVLLSISNFFSLTVDRRFNKRKGDLLLGRDQKRLSLSNHLQHVSLQNYAHTAMDKVIPTLTFGSLTMHWREADNDASTSMLQGEISRSVISRSLFLTGNDFPFRNVGNHALPTTFQDPFLCDDEARVSSSGFGKKMDYVETFSHAYSEENIHPLDHGICEINTSKDPLRESNEEEDMQVECDLKEGLVGSVTEREKEDINEVVNLATCGEELTYGLELENITCKDPIRESNEEEGIQVKCCLKEGLSGSGTEREKGDTTQLVNLATCREKLTYGLEPKNLRRALNFDKDEIPRNIGTQSTCKIAHPSSKKHLKSSTLKGGQRNDLHPKSQILTKSVACNKFDNDPNADEKKNEQNTRHKLKQIRNENMAETTSINPKVEKKAYPSFEPFTIEEEEGSGGYGTVYRARRKSDGKRLAIKCPHDNAHKNHINNERLMLERFGGKNFIIKFEDSFKSSSGDCFVLEHVEHDRPEVLKKEIDIVQLQWYGYCMFRALACLHKEGVVHRDVKPGNFLFSRRLNKGYLIDFNLAMDLKQKYNIGSKSKPSLDASNNIHLPSGSAPVVQDKNLVGSKSMPSSKREVADYKRNSQLNRQVKQKAYTGSQKNCPDKAGVTLLRAQGTDGSGITSAKDLTSSKAASAERLREILPSQGRKELISYALQNSMSSAKNSSIKGPSSQRKRVTAPSGKADGKIVYLTPMPLHSSATAGLLRSRGDGRQKREGSCVGTKGFRAPEVLFRSHFQGPKVDTWSAGVTLLYMVIGKSPFTGEPEQNIKEIAKLRGSEELWEVAKLHDRELSFPLELFDDRYLQSWDIKSWCKIQTKRPEFFEQIPKSLFDLLDKCLTVNPRNRISVEEVLRHEFFGSCHEIMRKQRMNRRGEAAASGTI 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0023 948 PANTHER CELL DIVISION CYCLE 7-RELATED PROTEIN KINASE 425 934 - -
Lal19g0023 948 SUPERFAMILY Protein kinase-like (PK-like) 432 928 IPR011009 -
Lal19g0023 948 MobiDBLite consensus disorder prediction 371 398 - -
Lal19g0023 948 PANTHER CASEIN KINASE-RELATED 425 934 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 683 702 - -
Lal19g0023 948 Coils Coil 412 432 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 384 398 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 729 752 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 729 746 - -
Lal19g0023 948 Gene3D Transferase(Phosphotransferase) domain 1 768 945 - -
Lal19g0023 948 Gene3D Transferase(Phosphotransferase) domain 1 414 609 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 409 424 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 628 672 - -
Lal19g0023 948 Pfam Protein kinase domain 784 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0023 948 Pfam Protein kinase domain 457 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0023 948 MobiDBLite consensus disorder prediction 651 671 - -
Lal19g0023 948 ProSiteProfiles Protein kinase domain profile. 455 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0023 948 MobiDBLite consensus disorder prediction 683 698 - -
Lal19g0023 948 MobiDBLite consensus disorder prediction 405 424 - -
Lal19g0023 948 SMART serkin_6 455 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0023 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0023 Lal-Chr19 169306 175624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0023 768 924 Core Cell Cycle Gene Families AT3G48750 29.814 8.35e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Lal19g0023 Pkinase 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0023 K02214 - gmx:100783107 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0023 19 169306 175624 Lal19g0023 19 169306 175624 ECH