Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0015 ATGTTGTTTGGGTTACCATTTAACTGTGTAACGAGTATCATAGGGTTTCACTATTCTGTTGCCAATAGGACATTGACATATTGTTCAATACCTGAACCCATTTCCAATTTGGACTCCGGTCGAGTGAGTAGGAGAAAAGGAGGCTCTTCATCATTATACATTCATCCTAGTTTACCTGAAATGAAGAAAGATATGTTGGTGACTCGCCAAAAGGTTTACGAGTTCTTGAGGAGTATTGGCATTGTTCCAGATGAGCTTGATGGCCTTGAACTTCCAGTCACAATTGAGGTTATGAGAGAACGCGTTGATTTCCTTCACAATTTGGGTCTCACAATTCAAGACATTAACAATTATCCACTTGTTCTTGGCTGCAGCGTCAAGAAGAATATGGTCCCCGTGCTCGATTACCTTGGTAAACTAGGCGTCAGGAAATCTACGCTCACACAGTTCTTGCAGAGATACCCGCAAGTGCTCCATGCTAGTGTGGTTGTGGATCTTGTGCCGGTGGTCAAGTATCTTCAAGGGATGGATATAAGGCCCGAAGACATTCCTCGCGTTCTTGAGCGGTACCCTGAAGTTTTAGGATTCAAACTTGAGGGAACCATGAGCACATCGGTTGCTTATTTGGTTGGAGTTGGGGTAGCAAGAAGGGAAATCGGAGGGGTCTTAACTAGATACCCTGAAATTTTGGGGATGAGAGTTGGTAGAATCATCAAGCCTTTTGTAGAGTTCCTACAGAACTTGGGAATTCCAAGGTTAGCCATTGCTAGACTGATAGAGCAACGGCCTTATATTCTTGGATTTGGGCTGGATGAGAAGGTGAAGCCAAATGTCAAATCCCTTGAAGAGTTTAATGTTAGGAGAACATCACTTCCATCTATAATCGCGCAGTATCCTGACATCATTGGAATTGACTTAAAGCCAAAGCTTGTCAATCAAAGAAGTTTACTCAATTCTGTACTTGATTTGGATCCTGAGGATTTTGGCAGAATTGTTGAGAAGATGCCACAAATTGTTAGTCTCAGTAGTGAACCTATGCTGAAGCATGTTGATTTTCTTAAGGATTGTGAATTTTCCTTGCAGCAAATAAGGGAGATGATTGTTGGATGCCCTCAACTACTTGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTCAAGATGGAGATGAAGAGACCTATGGAAGATTTGGTTACTTTCCCAGCATTCTTTACTTACGGTCTGGAGTCAACCATAAAACCTAGACAAAAGATGGTCGCCAAGAAAGAGTTGAAGTGTTCTCTTGGGTGGATGCTTAATTGTTCCGATGAGAAATTTCAGCAACGAATGGACTATGATACTATTGATATGGAAGAGATGGAAATGGAGCCATCATTTGACATGAATTCACTGATACAATCAAGGAGTTATGATGAATCCGGTTCTGATTATGAAGATAGTGATGATGATATTGATTAG 1464 0.4105 MLFGLPFNCVTSIIGFHYSVANRTLTYCSIPEPISNLDSGRVSRRKGGSSSLYIHPSLPEMKKDMLVTRQKVYEFLRSIGIVPDELDGLELPVTIEVMRERVDFLHNLGLTIQDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTLTQFLQRYPQVLHASVVVDLVPVVKYLQGMDIRPEDIPRVLERYPEVLGFKLEGTMSTSVAYLVGVGVARREIGGVLTRYPEILGMRVGRIIKPFVEFLQNLGIPRLAIARLIEQRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSIIAQYPDIIGIDLKPKLVNQRSLLNSVLDLDPEDFGRIVEKMPQIVSLSSEPMLKHVDFLKDCEFSLQQIREMIVGCPQLLALNIDIMKLSFDYFKMEMKRPMEDLVTFPAFFTYGLESTIKPRQKMVAKKELKCSLGWMLNCSDEKFQQRMDYDTIDMEEMEMEPSFDMNSLIQSRSYDESGSDYEDSDDDID 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0015 487 Gene3D Transcription termination factor 3, mitochondrial 102 239 IPR038538 -
Lal19g0015 487 Gene3D Transcription termination factor 3, mitochondrial 240 450 IPR038538 -
Lal19g0015 487 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 33 471 - -
Lal19g0015 487 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 364 395 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 292 324 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 329 359 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 396 427 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 184 215 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 256 287 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 SMART mt_12 49 82 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 Pfam mTERF 134 442 IPR003690 GO:0003690|GO:0006355
Lal19g0015 487 PANTHER CGI-12 PROTEIN-RELATED 33 471 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0015 Lal-Chr19 98371 99834 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal19g0015 mTERF 1.7e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0015 K15032 - gmx:100785223 751.125