Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0005 ATGGGAAACCTAGGCAAGATGTCACAAGTTCCTTTAAGTTGCTGCATAGTGATCAAGATGAACTCTAAGGCACAGAAGTCATCGCAGATGGAAGCAGAAAGGTCTGACCATGCCCAAGTTATTGAAATCAATGGACCTATTCCTGATGTAAGGAATTCAGAAGGAAGTAAGATTTGTGGGGAAGGACCATGTGGATTCGCAGATGCTGGATCCATCTCTAATGATTCTGAAGAACGATTAACTTCCATGCGAAAGCTTTTAATAGCTGTGGTCCTTTGTATTACTTTCATGACTGTTGAAATAGTTGGTGGCATCAAAGCTAACAGTCTCGCAATATTGACTGATGCAGCACATTTGCTTTCGGATGTTGCAGCCTTTGCCATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACTCCCCGTCAGTCATATGGATTTTTTCGAATAGAGATTCTCGGTGCTTTGGTTTCTATCCAAATGATATGGTTGCTTGCTGGGATTCTGGTATACGAAGCAATTGATAGAATCATTGCTGGCCCTCGCGAGGTGGATGGATTTTTAATGTTTTTAGTTTCTGCATTTGGTCTAGTGGTTAACATCCTCATGGCTTTTTTATTGGGGCATGATCACGGCCACGGACATGATCATCACGGCCATGAGCATGGTCATCATGGCCACAACCATGGATATTCAGTGTCTGCCCATCACGATCATGATGTAAAGCATACAATAACTGAGCACCATCATACTCATGATGATGAAAAGCATGGTCATGAAGGCCACATGCACCATGATGTTCACAAGGAAGTCAGTGAACCACTTCTTGGTGAATCAAAAGAGGGGCATGAGAAGAAGCGATGGAACATAAATGTACAGGGGGCTTATCTTCATGTACTTGGGGACTCTATTCAGAGTGTTGGGGTGATGATTGGGGGAGCAGTTATATGGTATAAGCCTGAATGGCAAATAGTTGATTTGATATGCACTTTAATCTTTTCAGTAATTGTTTTGGGGACTACTATCAATATGTTGAGAAACATATTGGAAGTCCTGATGGAGAGCACGCCACGTGAGATTGATGCAACACAGCTTGAAAGAGGGCTGTTGGAGATGGAAGAAGTAGTGGCTGTTCATGAGCTGCATATATGGGCCATTACAGTGGGGAAGGTTTTGCTAGCTTCTCATGTTAAAATCAGACCTGAAGCAAATGCAGACCTGGTGCTGGACAAGGTTATAAACTACATCAAAAGGGTTTATAATATCAGTCATATAACTATACAGATAGAGCGCTAG 1299 0.4249 MGNLGKMSQVPLSCCIVIKMNSKAQKSSQMEAERSDHAQVIEINGPIPDVRNSEGSKICGEGPCGFADAGSISNDSEERLTSMRKLLIAVVLCITFMTVEIVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIDRIIAGPREVDGFLMFLVSAFGLVVNILMAFLLGHDHGHGHDHHGHEHGHHGHNHGYSVSAHHDHDVKHTITEHHHTHDDEKHGHEGHMHHDVHKEVSEPLLGESKEGHEKKRWNINVQGAYLHVLGDSIQSVGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLERGLLEMEEVVAVHELHIWAITVGKVLLASHVKIRPEANADLVLDKVINYIKRVYNISHITIQIER 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0005 432 Pfam Cation efflux family 86 354 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal19g0005 432 Gene3D Cation efflux protein transmembrane domain 82 353 IPR027469 -
Lal19g0005 432 TIGRFAM CDF: cation diffusion facilitator family transporter 83 432 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Lal19g0005 432 SUPERFAMILY Cation efflux protein transmembrane domain-like 83 355 IPR027469 -
Lal19g0005 432 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 30 432 - -
Lal19g0005 432 PANTHER METAL TOLERANCE PROTEIN A1 30 432 - -
Lal19g0005 432 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 361 431 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0005 Lal-Chr19 51799 54362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0005 30 432 Inorganic Solute Cotransporters AT2G46800 68.796 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0005 K14689 - gmx:100794876 597.045