Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1670 ATGGGTTGTTGCCAATCATCAGCGAGAGAGAAAAGTGAAGGAAATCGACGACAACAAGAACAAGAACAAAAACAAAAACCCTATCATGTAACTTGTTCTTCTTCAATATCTGAAGGAGCACAGATAGATTCATCTTCAAATCCTGTTGGTTTGGATGGTTTCTCAGAGTTCTCATTATCTGAGCTTAAAGCAGCTACAAACAATTTCAGTTCAGAATTAATCGTATCTGAGAGTGGAGAGAAGGCACCTAACCTTGTATACAAAGGAAGATTAGTGAGTAACCGTGAATGGATAGCAGTGAAGAAATTCAGCAAAGGAGCATGGCCAGATCCGAAACAATTCGTTGAAGAAGCATCAGGTGTTGCTAAATTGCGTCATCCAAGGCTTGCTAATTTGATTGGTTATTGTTGTGATGCTGATCATAGGCTTCTTGTTGCTCAGTTTATGCCTAACGACACTCTCGCCAAGCATCTCTTTCACTGGGAACATCACACCCTTGAATGGGCAATGCGGCTGAGAGTAGCTCTCTATATTGCTCAAGCTTTGGATTATTGCAGTTCGGAAGGAAGGCCTTTATACCATGATTTGAATGCGTATCGAGTTCTCTTTGATCAAGAAGGTGATCCTCGTCTCTCATGCTTTGGTTTAATGAAGAACAGCAGGGATGGTAAAAGTTATAGCACTAATCTTGCTTATACTCCTCCTGAATATTTAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGCACTGTCCTATTAGACCTCCTCAGCGGCAAGCACATCCCTCCAAGCCATGCACTTGATATGATACAGGGGAAAAACAACATGCTGCTAATGGAGTCACATTTAGAGGGGAAGTTTTCTACCGAAGAGGCCACTGTAGTTGTCAATCTTGCCTCTAAGTGTTTGCAATATGAACCTAGGGAGCGGCCTGATACAAAGGAGTTGGTCACAACACTTGCCCCATTGCATACAAAACCTGAAGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCATGAGGAAGCTCCATCAATCCCACAACGTCCCCTTTCGGCAATGGGTGAGGCTTGTTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTTCAACACATTACAGAGACGATGAAGGAACTAACGAGTTGTCATTCCAAGAGTGGACACAACAGATGAGAGATATGTTGGAGGCGAGGAAGCGTGGAGACTACGCATTCCGTGACAAGGATTTTAAGACAGCTATTGATAACTATTCCCAGTTTATCGATGTGGGAACTATGGTCTCCCCAACTGTTTTTGCAAGGCGCAGTCTCTGCTATCTGTTATGTGACCAACCAGATCCGGCACTTAGAGATGCAATGCAAGCGCAATGCGTTTATCCGGACTGGCCTACGGCCTTTTACATGCAATCAGTTGCGCTTGCAAAGCTGGACATGAACAAGGATGCAGCAGATATGTTAAATGAGGCAACCACATTGGAAGAGAAGAGGCAAAGAGGAGGCAGAGGATCATAG 1530 0.4379 MGCCQSSAREKSEGNRRQQEQEQKQKPYHVTCSSSISEGAQIDSSSNPVGLDGFSEFSLSELKAATNNFSSELIVSESGEKAPNLVYKGRLVSNREWIAVKKFSKGAWPDPKQFVEEASGVAKLRHPRLANLIGYCCDADHRLLVAQFMPNDTLAKHLFHWEHHTLEWAMRLRVALYIAQALDYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMESHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKELVTTLAPLHTKPEVRSHIMLGIPKHEEAPSIPQRPLSAMGEACSRMDLTAIHQILVSTHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMNKDAADMLNEATTLEEKRQRGGRGS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1670 509 ProSiteProfiles Protein kinase domain profile. 72 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1670 509 Gene3D Tetratricopeptide repeat domain 398 506 IPR011990 GO:0005515
Lal18g1670 509 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATED 1 508 - -
Lal18g1670 509 MobiDBLite consensus disorder prediction 1 47 - -
Lal18g1670 509 MobiDBLite consensus disorder prediction 25 47 - -
Lal18g1670 509 Coils Coil 481 501 - -
Lal18g1670 509 SUPERFAMILY Protein kinase-like (PK-like) 49 329 IPR011009 -
Lal18g1670 509 SUPERFAMILY TPR-like 401 502 IPR011990 GO:0005515
Lal18g1670 509 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 508 IPR045845 GO:0004672|GO:0009742
Lal18g1670 509 MobiDBLite consensus disorder prediction 10 24 - -
Lal18g1670 509 Gene3D Phosphorylase Kinase; domain 1 46 148 - -
Lal18g1670 509 Pfam Protein tyrosine and serine/threonine kinase 86 324 IPR001245 GO:0004672|GO:0006468
Lal18g1670 509 Gene3D Transferase(Phosphotransferase) domain 1 150 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1670 Lal-Chr18 17913089 17917401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1670 57 348 Glycoside Hydrolase AT3G07070 33.121 1.41e-44 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lal18g1670 PK_Tyr_Ser-Thr 2.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1670 K14500 - gmx:100808907 889.412