Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1646 ATGCATGCATCAGAGAATTATACAAGTTCAAGCATGTACCATGAACCATTGCAACAAATGGAGGCATATTGTTTGCCTCAGTATCAGACTCTAAATCATCAGCTATACTACATTGACGGAGGCCATGGAACTACCAACTTCTCGAATCCAATTTCTTCGGAACTTTACTGCACACTGGAGTCATCGTCCGGGATTGAAAGTCTCACTGTTTATAACTCCACCTCAACTGTTAATTTCACACCTAATGGAAGCCCAATATCATGGCAGGATTCTCATTCTTATCCACCTGACCAGTATCATAATAATCATTCCCCTGACAATACCTATATCTCTTCGATGAGTGGCTCATGCATAACCAATGATTTGAGCAGCTTCAAGCACAAGCTGAGAGAGCTCGAAAGTGTAATGTTTGGCCCTGACTCTGATAACATCGATGATAGCTATGACACTGTCATCAAGGATGGAGCTAACTTTGTCTCACCTGAGGTGGAAATTTGGAGACAAGCAATGATGGGGAATTGTAGTAAAAACCTAAAGAATGTCCTCATTGGGTGTGCTAAAGCGGTAGCTGATACTGATTTGCATATGGCACAATGGCTGATGGACGAGTTAAGACAAATGGTGTCAGTTTCTGGCGAACCAATACAAAGGTTGGGTGCATACATGTTGGAAGGACTTGTTGCGAGATTGTATTCCACTGGGAGTTCAATCTACAAATCCTTAAGATGCAAGGAACCAGAAAGTGCTGAGCTCCTCTCTTACATGCACATACTTTATGAAGTTTGTCCTTACTTCAAATTCGGCTACATGTCTGCGAATGGAGCCATCGCTGAAGCTATGAAACATGAGGACAGAGTTCATATAATTGATTTCCAAATTTCACAAGGATGCCAGTGGATCACTTTAATTCGGGCTTTTGCAGCTAGGCCTGGGGGCCCACCACACATTCGAATCACAGGTATTGATGATTCAACATCGGCTTATGCCCGTGGAGGTGGACTGCATATAGTTGGAAAAAGGTTATCCAAGCTTGCCAGGCATTTTAAGGTGCCATTTGAATTTCACGCTGCAGCTATGTCTGGTTGTGATGTTCAGCTGCACAAACTTGGTGTTAGACCGGGTGAGGTGCTGGCCGTAAATTTTGCATTCATGCTGCATCACATGCCTGATGAAAGTGTGAGTATTGAGAATCACAGGGACATGCTGCTGAGATTGGTGAAGAGCCTGTCTCCAAAGGTGGTGACACTTGTTGAGCAAGAGTCTAACACAAACACTGCTGCGTTCTTTCCACGTTTCCTTGAAACACTGGACTATTACACAGCTATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGAGCATAAGGAGAGAATAAATGTTGAGCAGCATTGCTTGGCAAGGGACCTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAAAGACACGAGGTGCTTGGGAAGTGGAGGTCAAGATTTGCAATGGCTGGTTTCAGTCCTTACCCTTTGAGCTCATTGGTAAATTGCACTATTAAGAAACTGCTTGATAACTATAGTGATAGATATGGACTAGAAGAGAGAGATGGAGCTTTATATCTGGGTTGGATGAATAGAGACTTGGTTACTTCTTCTGCATGGAAATGA 1647 0.4335 MHASENYTSSSMYHEPLQQMEAYCLPQYQTLNHQLYYIDGGHGTTNFSNPISSELYCTLESSSGIESLTVYNSTSTVNFTPNGSPISWQDSHSYPPDQYHNNHSPDNTYISSMSGSCITNDLSSFKHKLRELESVMFGPDSDNIDDSYDTVIKDGANFVSPEVEIWRQAMMGNCSKNLKNVLIGCAKAVADTDLHMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLYSTGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKHEDRVHIIDFQISQGCQWITLIRAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLARHFKVPFEFHAAAMSGCDVQLHKLGVRPGEVLAVNFAFMLHHMPDESVSIENHRDMLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFSPYPLSSLVNCTIKKLLDNYSDRYGLEERDGALYLGWMNRDLVTSSAWK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1646 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 548 IPR005202 -
Lal18g1646 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Lal18g1646 548 Pfam GRAS domain family 178 548 IPR005202 -
Lal18g1646 548 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1646 Lal-Chr18 17803593 17805239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1646 12 548 GRAS Transcription Factor Family AT5G48150 62.915 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal18g1646 GRAS 8.2e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1646 - - gmx:100796496 918.687