Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1642 ATGGCCATTTCTGCTATCCAGCAATCAGCCTTTACTGCCCAGGCTGCTTTGAAGGGAAATGAGTTTGTCAGGAAGGCTGGTGGCTTTGGAAAAGGTCGCATTACTATGCGTAGAACAGTCAAGAGTGCTCCTCAGAGCATCTGGTATGGCCCTGACCGTCCAAAGTACTTGGGACCCTTCTCAGAACAAATTCCATCATACTTGACTGGTGAATTCCCTGGTGACTATGGATGGGATACAGCTGGATTATCAGCTGACCCTGAAACCTTTGCCAGGAACCGTGAGCTCGAGGTGATTCACAGCAGATGGGCCATGCTTGGTGCACTGGGATGTACCTTTCCAGAGGTCCTTGAAAAGAATGGCGTCAAATTCGGTGAATCAGTGTGGTTCAAGGCTGGTGCTCAGATCTTCTCTGAGGGTGGCCTTGACTACTTAGGCAACCCAAACCTGATTCATGCTCAGAGCATCCTTGCAATCTGGGCTGTTCAGGTTGTACTCATGGGATTAATTGAAGGCTACAGGGTTGGTGGAGGACCACTTGGAGAAGGACTAGACCCACTATACCCTGGTGGTGCCTTTGACCCACTTGGTCTTGCTGATGATCCGGAGGCATTTGCAGAGTTGAAGGTGAAGGAACTCAAGAACGGCAGATTGGCAATGACCTCAATGTTTGGTTTCTTTGTTCAGGCCATTGTTACTGGCAAGGGCCCTATTCAGAACCTTTATGACCATGTTGCTGATCCTGTTGCCAACAATGCATGGGCTTATGCCACTAACTTTGTCCCTGGACAATGA 795 0.4918 MAISAIQQSAFTAQAALKGNEFVRKAGGFGKGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEVLEKNGVKFGESVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMTSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1642 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Lal18g1642 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Lal18g1642 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 264 - -
Lal18g1642 264 Pfam Chlorophyll A-B binding protein 65 230 IPR022796 -
Lal18g1642 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1642 Lal-Chr18 17761973 17763458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1642 1 264 Chloroplast and Mitochondria Gene Families AT2G05070 86.038 3.80e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1642 K08913 - gmx:100815789 506.138