Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1627 ATGAAAGCAATGTTGTCACTTTCTCCCAAAATCTTCTCCCTCACTTTGCTTCTCTCAATAAACTCTCTTTTCATTCAATGTTCTTACTCCCTTAATGAACAAGGCCATGCTCTTTTAGCATGGAAAAACAGTTTAAACAACACTAGAGATGCATTAGCATCTTGGAATACTTCAAACCAAACCCCATGCAACTGGTTTGGGGTGCACTGCAACACACAAGATGAAGTGGTAGAGATAAACCTCAAATCAGTGAACTTGCAAGGCTCATTATTACCTTTTTATTTTCTTCAATCTCTTAAGTCCTTGAAGATTCTTATCCTCTCTTCAACCAACATCACAGGCAACATTCCAAAAGAAGTTAGAGATTATGAGGGACTCATTCATATTGATCTTAGTGGCAACTCTCTCTTTGGTGAAATACCACAAGAGATTTGCAGGCTAACAAAACTTCAAACTCTAGCTCTACATACAAACTTTCTTGAAGGAAACATTCCATCCAAGATAGGAAACTTATCAAGTCTTGTGAACTTGACACTCTATGACAATAAATTGAGTGGTGAAGTTCCAAAGAGTGTTGGCTCATTAAGTAAGTTACAAGTGTTGAGAGCAGGAGGGAATAAAAACCTTAAAGGTGAGATTCCATTTGACATTGGAAACTGCACCAACTTGATCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGTATTCTTCCTTCATCAATAGGGAACCTGAAAAAAATTCAAACCATAGCCATTTACACAACACTGTTATCTGGCTCTATTCCTGAAGATATTGGTAACTGCACTGAGCTGCAGAACCTGTACTTGTATCAGAACTCAATTTCTGGTTCAATACCAAGTCAAATTGGAGAGCTCAACAAGCTTCAGAATCTACTCTTATGGCAAAACAGATTAGTAGGTACAATCCCAGAAGAGCTTGGAAGATGCACAGAGGTTATAGTCATAGACTTCTCAGAGAATCTTCTCACAGGTAGAATACCAATGAGCTTTGGAAAGTTACAAAATCTCCAAGGGCTTCAACTGAGTGTTAATCAGCTTTCAGGTATCATACCTCCTGAAATTACAAATTGCACTTCATTGGCCCAATTTGAAGTTGACAACAATGCTATCTCTGGTGAGATTCCTGCTCTTATTGGCAACTTGAGAAGCTTGAATCTGTTCTTTGCATGGAAGAACAATCTATCAGGAAAAATCCCTGATAGTCTTGCACAGTGCCAAGATCTTCAGGCACTTGATTTGTCTTACAACAATTTCACTGGTCCAATTCCAAAAGAGCTATTTGGTTTGAGGAATCTCACTAAACTGATGCTCCTTTCCAATGATTTATCAGGCTTTATTCCAGCTGAAATTGGTAACTGCACAACTCTTTACAGGTTAAGGTTAAATCACAATAGACTTGCAGGTACTATTCCATCTGAGATATCCAACTTGAAGAACTTGAATTTTTTGGATATGAGTAACAACTTTCTTGTAGGGAAGATTCCTCCAACACTGTCTAGATGCCAAAACCTTGAATATTTAGACCTCCATTCCAATAGTTTCTCTGGTCTAGTACCACATACTTTGCCAAAAAGTCTTCAGTTAATTGACTTATCAGATAACATGCTAACTGGTTCATTGAGTCATTTCATTGGTTCATTAACTGAATTGACCAAACTCAACTTGGGACAGAATCATCTAAGTGGAACAATCCCACCTGAGATTCTATATTGCTCTAAGCTACAACTTCTAGACTTGGGAAGCAATGGTTTCTCTGGTCAAATTCCAAAAGAAGTTGGTCAAATTCCTTCACTAGAAATCTCTCTCAATCTTAGTTATAACCAGTTTTCTGGTGAAATTCCATCTCAGTTTTCTAGTCTAAGAAAACTAGGAGTTCTTGATCTCTCTCACAACAAGTTCTCAGGGAATTTAGATGTTCTTTCTGACCTTAAGAATCTTGTTTCCTTAAATGTTTCATCCAATGACTTCTCTGGCAAGTTGCCTAACACTCCATTCTTCCATAAACTCCCTCTCAGTGATTTCACTGGAAATGATGGTCTCTACATTGCAACTGGTATTGTAACTCCCTATGAAGGAATGAGACACAAAAACCAAGCCAGCTTAGTTTTTAAGATCATAATGGCCATTCTTTTAAGCACCACTACAGTACTAGTACTTCTCACAATCCATGTCGCGGTTCGTGCTCATGTTACCAACAAAGCTCTCAAGGAAAATGAAACTTGGGAGATAACTTTGTATCACAAGTGTGAACTCTTAATTGATGACATTGTTAGGAATTTGACATCAGAAAATGTGATTGGCACTGGAAGTTCTGGAGTTATGTACAAGGTAACAATTCCAAGTGGCCAAACAATAGCAGTTAAAAAGATGTGTCCTTCAGCAGAATGTAGAGCATTCAGTTCTGAAATCCAAACACTGAGTTCAATTAGACATAAGAATATCATTAAGCTTATAGGTTGGGCATCCAATAAGAACATGAAGCTGCTGTTTTATGAGTACCTCCCTAATGAAAGCCTGAGTTCATTAGTTCATGGTTCAGGGAAGGGAAAAGCAGAATGGGAGACCAGATATGGTATTATATATGGAGTGGCTCATGCACTTGCATATTTGCACCATGATTGTGTGCCTTCTATAGTTCATGGAGATATCAAAGCCATGAATGTGTTATTAAGTCATGGCTATCAACCTTACCTTGCTCACTTTGGCTTGCCAACAATTGCAAGTCAAAATGGTCATCATGCTAATTCCAAGCCACTTCATCTTGCTGGTTCCTATGGATACATGGCGCCAGAACATGCATCAATGCAGCAAATAACTGTGAAGTGTGATGTATACAGTTTTGGTGTGATCCTACTTGAGATCCTAACAGGAAGGCACCCATTAGACCCAACTCTAGCTAGTGAAACACACTTGGTTCAGTGGGTTAAGAACCATTTAGCTAACAAAGGAGATGTATCAGACATTCTTGACCCAAAGCTGAGAGGTAGGACTGACCCTATTACAATGCATCAAATGCTACAAACTCTAGCTCTGTCATTTTTATGTGTCACCACAAAAGCTGATGACCGTCCTACAATGAAGGACATTGTTGCAATGCTCAAGGAAATTCTACCTGTTGAATAA 3144 0.3861 MKAMLSLSPKIFSLTLLLSINSLFIQCSYSLNEQGHALLAWKNSLNNTRDALASWNTSNQTPCNWFGVHCNTQDEVVEINLKSVNLQGSLLPFYFLQSLKSLKILILSSTNITGNIPKEVRDYEGLIHIDLSGNSLFGEIPQEICRLTKLQTLALHTNFLEGNIPSKIGNLSSLVNLTLYDNKLSGEVPKSVGSLSKLQVLRAGGNKNLKGEIPFDIGNCTNLIMLGLAETSISGILPSSIGNLKKIQTIAIYTTLLSGSIPEDIGNCTELQNLYLYQNSISGSIPSQIGELNKLQNLLLWQNRLVGTIPEELGRCTEVIVIDFSENLLTGRIPMSFGKLQNLQGLQLSVNQLSGIIPPEITNCTSLAQFEVDNNAISGEIPALIGNLRSLNLFFAWKNNLSGKIPDSLAQCQDLQALDLSYNNFTGPIPKELFGLRNLTKLMLLSNDLSGFIPAEIGNCTTLYRLRLNHNRLAGTIPSEISNLKNLNFLDMSNNFLVGKIPPTLSRCQNLEYLDLHSNSFSGLVPHTLPKSLQLIDLSDNMLTGSLSHFIGSLTELTKLNLGQNHLSGTIPPEILYCSKLQLLDLGSNGFSGQIPKEVGQIPSLEISLNLSYNQFSGEIPSQFSSLRKLGVLDLSHNKFSGNLDVLSDLKNLVSLNVSSNDFSGKLPNTPFFHKLPLSDFTGNDGLYIATGIVTPYEGMRHKNQASLVFKIIMAILLSTTTVLVLLTIHVAVRAHVTNKALKENETWEITLYHKCELLIDDIVRNLTSENVIGTGSSGVMYKVTIPSGQTIAVKKMCPSAECRAFSSEIQTLSSIRHKNIIKLIGWASNKNMKLLFYEYLPNESLSSLVHGSGKGKAEWETRYGIIYGVAHALAYLHHDCVPSIVHGDIKAMNVLLSHGYQPYLAHFGLPTIASQNGHHANSKPLHLAGSYGYMAPEHASMQQITVKCDVYSFGVILLEILTGRHPLDPTLASETHLVQWVKNHLANKGDVSDILDPKLRGRTDPITMHQMLQTLALSFLCVTTKADDRPTMKDIVAMLKEILPVE 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1627 1047 Gene3D Ribonuclease Inhibitor 284 376 IPR032675 -
Lal18g1627 1047 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1046 - -
Lal18g1627 1047 Pfam Leucine Rich Repeat 126 147 IPR001611 GO:0005515
Lal18g1627 1047 Gene3D Ribonuclease Inhibitor 188 283 IPR032675 -
Lal18g1627 1047 SMART LRR_typ_2 340 364 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 484 508 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 147 171 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 509 531 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 436 460 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 292 316 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 627 650 IPR003591 -
Lal18g1627 1047 SMART LRR_typ_2 554 578 IPR003591 -
Lal18g1627 1047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
Lal18g1627 1047 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Lal18g1627 1047 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Lal18g1627 1047 Gene3D Ribonuclease Inhibitor 608 692 IPR032675 -
Lal18g1627 1047 Gene3D Ribonuclease Inhibitor 377 607 IPR032675 -
Lal18g1627 1047 SUPERFAMILY L domain-like 437 685 - -
Lal18g1627 1047 SUPERFAMILY Protein kinase-like (PK-like) 757 1040 IPR011009 -
Lal18g1627 1047 SUPERFAMILY L domain-like 208 522 - -
Lal18g1627 1047 Pfam Leucine rich repeat 462 520 IPR001611 GO:0005515
Lal18g1627 1047 Pfam Leucine rich repeat 608 663 IPR001611 GO:0005515
Lal18g1627 1047 ProSiteProfiles Leucine-rich repeat profile. 629 651 IPR001611 GO:0005515
Lal18g1627 1047 Pfam Protein kinase domain 769 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1627 1047 ProSiteProfiles Protein kinase domain profile. 767 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1627 1047 Gene3D Phosphorylase Kinase; domain 1 731 840 - -
Lal18g1627 1047 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1046 - -
Lal18g1627 1047 Gene3D Transferase(Phosphotransferase) domain 1 841 1046 - -
Lal18g1627 1047 SUPERFAMILY L domain-like 32 305 - -
Lal18g1627 1047 SMART serkin_6 767 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1627 Lal-Chr18 17668439 17672469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1627 25 1043 Receptor kinase-like Gene Family AT5G56040 63.619 0.0 1299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal18g1627 Pkinase 5.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1627 - - gmx:100775762 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1627 18 17668439 17672469 Lal18g1627 18 17668439 17672469 ECH