Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1602 ATGATGCCTAGTGTTAGCATTGACACTTGTGACAATGATTCTGAGCCATTTGTTGAAGTTGATCCAACTGGCCGCTATGGCAAATATAGTGAGCTACTTGGATGTGGTGCTGTAAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATTGAAGTGGCTTGGAACCAAGTGAACCTAAGGAATTTCTGTGATGACCCTGCAATGATGGATAGGCTTTACTCTGAAGTGAGGTTGCTTAGAAGCATGACCAATAAAAACATCATTGCCCTTTACAATGTGTGGAAGGATGGGCAGAAAAACACACTCAATTTCATCACTGAGGTGTGTACTAGTGGCAATTTGAGAGAGTACAGGAAGAAGCACAAGCATGTTTCTATGAAGGCCCTTAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATTTGCATATGCATGACCCATGTATCATTCACAGAGACCTCAATTGCAGTAATGTCTTTGTCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGAACGAACCATATTGCACATTCAATTCTAGGCACACCAGAATTCATGGCTCCAGAATTATATGATGAAGACTACACAGAATTGGTGGACATATACTCATTTGGGCTATGTGTGTTAGAGATGGTCACATTGGAAATTCCTTATAGTGAATGTGACAGTGTTGCAAAGATATACAAAAAGGTGACTTCTGGAGTGAGACCTGAGGCCTTAAACAAGGTCCAAGATGCAGAGGTGAAGGGCTTCATTGAGAAGTGCCTTGCTCAACCAAGGGCAAGACCTTCAGCTGCTGAGCTTCTCCAAGATTCTTTCTTTGATGAGCTTGTTGAAGATGATGATGAAAATGATGATTGTTCTTGTTCATACTAA 909 0.4125 MMPSVSIDTCDNDSEPFVEVDPTGRYGKYSELLGCGAVKKVYRAFDQEEGIEVAWNQVNLRNFCDDPAMMDRLYSEVRLLRSMTNKNIIALYNVWKDGQKNTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSKQILKGLNYLHMHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGTNHIAHSILGTPEFMAPELYDEDYTELVDIYSFGLCVLEMVTLEIPYSECDSVAKIYKKVTSGVRPEALNKVQDAEVKGFIEKCLAQPRARPSAAELLQDSFFDELVEDDDENDDCSCSY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1602 302 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Lal18g1602 302 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 302 - -
Lal18g1602 302 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1602 302 CDD STKc_WNK 25 285 - -
Lal18g1602 302 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 302 - -
Lal18g1602 302 SUPERFAMILY Protein kinase-like (PK-like) 21 285 IPR011009 -
Lal18g1602 302 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Lal18g1602 302 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1602 Lal-Chr18 17506978 17509479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1602 11 289 MAP Kinase Kinase Kinase AT5G55560 81.362 3.85e-178 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal18g1602 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1602 K08867 - gmx:100816060 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1602 18 17506978 17509479 Lal18g1602 18 17506978 17509479 ECH
Lal18g1602 18 17506978 17509479 Lal18g1602 18 17506978 17509479 PCT