Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1581 ATGGCACTTAGTGTTTCTTCCCCATCGACTAACTCAAGTCCAATAAGGAAGTGGAAGTATGAAGTTTTCTTGAGTTTTCGGGGAGAAGACACACGTTTTGGCTTCACAGACCACTTATACAATGGTTTGAAGAATAAAGGGATAGTTACTTTCAGGGACAACGAAGGACTTGAAAGAGGAGATGTTATTTCAAAAGAACTGTTCAAAGCAATTGAAGAATCCTTGTGTGCAGTAGTTATTCTATCTCAAAACTATGCTTCTTCAACATGGTGTTTGAAAGAACTGGAGAAGATACTTGAATCTAAAAACAGGTTAGGTCAACAAGTTTTGCCTATATTTTATGGTGTTGAACCATCTGATATAAAAGACCAGAAGGGGAGTTTTTCTGAAGCATTCAAGATACATGAGATAAGATTTAAGGATGATAAACAAAAAGTGCAGAATTGGCGAGATGCTTTAACTCAAGTTGCAGATTTAGCGGGCCTGAGTTCCATTAATTGTTATGAAACAGAACTGATTGAAAAGATTGCTGAAACAGTAAGTGCGAAATTACTTCCAAGATTGTCATTTAGCTTTGATGGTTTAATTGGAATTGGTTCAAAAGTTGCAGAGATGAAATCACTTTTAGAGATGGGATTAGAGGATGATGTTTGTTTTGTTGGAATATGGGGCATGGGTGGAGTAGGTAAGACAACTCTTGCTAGCGTTGTCTATGAAGGGATCCGAAATGAATTTGAAATTAGTTGCTTTGTTGCAAATGTTAGAGAGGTTTCTGAGAAATTTGGTTTAGCTCATTTACAAAGGGAACTTCTTTCTCCTCTCAAACATACAAACTTTCAAATAAAAAATGAAACGGAAGGGAGGGACAAAATAAGGCACTTTTTAAGCCATATGAAAGTTCTTATTGTCCTTGATGATGTTAGTGACAAAAGGCAACTACAGTATTTAGTTGGAAAACAAGAGTGGTTTGGTAAAGGAAGCAGAGTAATTATAACCACAAGAGATAAGCACTTGCTAACACCAAAAAGACTATTCAAAAATTATGATATTGAAATGTTAAATAGTGATCAATCACTTAAGCTCTTATGTCTAAATGCATTTCATGAAGATCAACCTGAAGCTGGTTATTTGGATTTGTCCAAAGCTATATGTAACCTTTGTGGAGGCCTTCCTTTAGCACTTGAAGTCATGGGCTCATTTCTTTGTGAAAGGAGTGTATTTGAATGGCAAGATGCTTTAAATAGGATGGAGCAAAATGTAGGAGATGGTGATGTTATTCTCAAGACACTTCAAATAAGTTATGATGGATTGAGAATGGATGATAGAGCTATATTTCTAGACATTGCATGTTTTTTCAACAATATGGAAGAGAATATGCTGAGAACATTCTTGAAAGATTGTGGTCTTAATTCAATTCTTGGACTCAATATGCTTCTTGAGAAATCACTGGTAGCTTATAATAAGACACGTATTCACATGCACGATATGCTTGTCCAATTGGGCAAGACTACGGTTTTGGATGAATCTCATTATGATGCTGGCAAGCGCAGTAGGTTATGGTCTCAGAAGGATATTGATAAAGTATTGGGAGAAAATGAGGGAGGAAGAGAAATTCAAGGGATAGTTTTCAAATCACCAAAACCATATCAGGCAGATTGGGACGAAAATTGCTTCTCTGATATGAAAGGTCTTAGGTTACTTGTGCTACAAAATGTGTATCTGTTACATGGTCTCAAATCTCTTCCTAGTGCATTGAAAGTTCTTGTTTGGGAGGGATATGCTATGAATGCTCTGCCACACATTGCTAAATCAAATGAACTTGTGAGTCTTATGTTGCCTTCTAGTAAGCTGTCACAACTTTGGAATAACACACAGTTTTTAGGAAAGTTGAGGGTCATGGATCTGCGCCACTCCAAAGATCTGACCACAACTCCAGAGTTTGATAGAATTCCAAATCTAGAATCATTGATCCTGGAGGGTTGTGTAAGTTTAGATCAGGTTCATGAATCTCTTGGAAAGCATAAGAAGCTTGTCAACGTGGATTTCACAGGTTGCAAGAATCTAACAGCCCTCCCAAGTAAATTGTGGATGAATTCTCTAGAGACATTAATCTTAACTGACTGCATAAAACTTGAAAATCTCCCCGAGTTTGATGAAAATATGCGAAGCTTATCAATGCTTCACTTAGAGAATACTGCTATAGAAGAATTACCTCCATCACTTGGCTTCTTAACTAGTCTTTCTGTTTTGAACTTAAAGGGTTGCAATAATTTGGTTTCCTTCCCAAATACCATGTGCAATTTGAAGTCTTTTCGAATTTTCAACATTTCTCTTTGCTCACAAATACAAAGGTTTCCAGAAAATCTGAATGAACATGTGCATTTGGAGGAGCTTCATGCTGGTGCAACTGCTATAACAGAAATACCCTCATACATTAATGAATTCAATAACCTCAAAATATTATCATTTCAAAGATGCAGAGGGAGAGGTTCCATCTCATCCACCTTACCCCTTCCATTGCCTCCTTCTTTCTCAGGTCTCTCCCTATTGACAGAATTGGACTTAGCTTTCTGTAATCTCCACGACGAATCGATCACTAGTGGTTTTAATTGCTTGTCATCGTTGTGGAAGTTGAATCTAATGGGAAATCATTTTGTTAACCTTCCTGTTGGATGCATGTCTAATCTTTTAAAGCTAGAACAACTAAACTTGAGTTACTGCTTTTGGCTTCAGTCGCTACCGCATATTCCACCAAAACTACATCAACTCTTTGCAATACATTGTTATTCTATGAAACCTTTATTAGACCAGCAACTGTGGAATCTCTTTGCATCACATCACTTCCAGAACTACAACACACCCAATGCTGGTGTAGATTTTATCTTTCTTATGAATGAGAATGAAATTCCATCGTGGTTTGTCAATAGAAGGTATCACTGTGAAGACTCGGTACAGTCGATGTGTAATAAAAGTATATCAATAACAATGGAGATTCCTCATGATGATTCTCATGACTGGTCAGGAATTGCTGTGTGCCTTGTGTTGGAAGAATTGTTGCCTGAATCTATGTGTTTACGTTCCATTTATTGGTATTTTAAATCTCCGGAATATGAAGGGTACACTGGAAGAACATATTTCAAATTTTATGATGGGAGTGATAATAGTAAGGTTTTCATTGGGTTTTTTCCTTTCACGGACTCCAACTGTTGGCGGCATTTAATAGGGGGAGTGAACCAAAAGCTTAAATTGACAATGTACTGTAAGAATGAAACCACGTTGAACGGTGCTCCACTTACTCCTGAAGAGGAGGATGGTGTGGTAGGAATAAGGGATTGTGGTTGGCGTTTATTATGTAAGCAAGACTTTGAAATTTGGCACAAAACAATGGGTGATTGCAATGCTAGTACTAGTAGTGCTAGTGCTGTTGCTAGTACTAGTGCTAGTAGCAGAGAGATTGAGGTCATTTCTTCTGATGACTTTCACTATGAAAGTGTGACCGAGGTTAGCAGTGAAAATAACCAATGCCAAGAAAAGCATGAGGAGCAATATGCAAATGAAACAGAAGAACCCAATGAAAGTGCTAGTGCTAGTGTTAGTAGCAGAGAGATTGAGGACTTCCACAATAAAAGTATGACCGAGGTTAACAACGAAAATAACCAATGCCAAGATAAGCTTGAGGAACAATATGCAAATGAAACAGAAGAACCCAAATCCTTTTTGAGAACCTGTTTTACCTTCTTCATGGCATTTTGTGACAAGGATATGAATGGTTCCAGATGA 3780 0.3741 MALSVSSPSTNSSPIRKWKYEVFLSFRGEDTRFGFTDHLYNGLKNKGIVTFRDNEGLERGDVISKELFKAIEESLCAVVILSQNYASSTWCLKELEKILESKNRLGQQVLPIFYGVEPSDIKDQKGSFSEAFKIHEIRFKDDKQKVQNWRDALTQVADLAGLSSINCYETELIEKIAETVSAKLLPRLSFSFDGLIGIGSKVAEMKSLLEMGLEDDVCFVGIWGMGGVGKTTLASVVYEGIRNEFEISCFVANVREVSEKFGLAHLQRELLSPLKHTNFQIKNETEGRDKIRHFLSHMKVLIVLDDVSDKRQLQYLVGKQEWFGKGSRVIITTRDKHLLTPKRLFKNYDIEMLNSDQSLKLLCLNAFHEDQPEAGYLDLSKAICNLCGGLPLALEVMGSFLCERSVFEWQDALNRMEQNVGDGDVILKTLQISYDGLRMDDRAIFLDIACFFNNMEENMLRTFLKDCGLNSILGLNMLLEKSLVAYNKTRIHMHDMLVQLGKTTVLDESHYDAGKRSRLWSQKDIDKVLGENEGGREIQGIVFKSPKPYQADWDENCFSDMKGLRLLVLQNVYLLHGLKSLPSALKVLVWEGYAMNALPHIAKSNELVSLMLPSSKLSQLWNNTQFLGKLRVMDLRHSKDLTTTPEFDRIPNLESLILEGCVSLDQVHESLGKHKKLVNVDFTGCKNLTALPSKLWMNSLETLILTDCIKLENLPEFDENMRSLSMLHLENTAIEELPPSLGFLTSLSVLNLKGCNNLVSFPNTMCNLKSFRIFNISLCSQIQRFPENLNEHVHLEELHAGATAITEIPSYINEFNNLKILSFQRCRGRGSISSTLPLPLPPSFSGLSLLTELDLAFCNLHDESITSGFNCLSSLWKLNLMGNHFVNLPVGCMSNLLKLEQLNLSYCFWLQSLPHIPPKLHQLFAIHCYSMKPLLDQQLWNLFASHHFQNYNTPNAGVDFIFLMNENEIPSWFVNRRYHCEDSVQSMCNKSISITMEIPHDDSHDWSGIAVCLVLEELLPESMCLRSIYWYFKSPEYEGYTGRTYFKFYDGSDNSKVFIGFFPFTDSNCWRHLIGGVNQKLKLTMYCKNETTLNGAPLTPEEEDGVVGIRDCGWRLLCKQDFEIWHKTMGDCNASTSSASAVASTSASSREIEVISSDDFHYESVTEVSSENNQCQEKHEEQYANETEEPNESASASVSSREIEDFHNKSMTEVNNENNQCQDKLEEQYANETEEPKSFLRTCFTFFMAFCDKDMNGSR 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1581 1259 Gene3D Ribonuclease Inhibitor 721 948 IPR032675 -
Lal18g1581 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 448 IPR027417 -
Lal18g1581 1259 SUPERFAMILY L domain-like 555 931 - -
Lal18g1581 1259 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 734 1044 IPR044974 GO:0006952
Lal18g1581 1259 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 773 IPR044974 GO:0006952
Lal18g1581 1259 Pfam TIR domain 19 185 IPR000157 GO:0007165
Lal18g1581 1259 SMART till_3 19 159 IPR000157 GO:0007165
Lal18g1581 1259 PRINTS Disease resistance protein signature 219 234 - -
Lal18g1581 1259 PRINTS Disease resistance protein signature 294 308 - -
Lal18g1581 1259 PRINTS Disease resistance protein signature 387 401 - -
Lal18g1581 1259 PRINTS Disease resistance protein signature 742 758 - -
Lal18g1581 1259 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Lal18g1581 1259 SUPERFAMILY "Winged helix" DNA-binding domain 426 529 IPR036390 -
Lal18g1581 1259 MobiDBLite consensus disorder prediction 1168 1203 - -
Lal18g1581 1259 Gene3D - 188 343 IPR027417 -
Lal18g1581 1259 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Lal18g1581 1259 Gene3D - 352 438 IPR042197 -
Lal18g1581 1259 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 734 1044 - -
Lal18g1581 1259 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 773 - -
Lal18g1581 1259 Pfam NB-ARC domain 207 435 IPR002182 GO:0043531
Lal18g1581 1259 Gene3D - 16 187 IPR035897 -
Lal18g1581 1259 Coils Coil 1211 1231 - -
Lal18g1581 1259 Gene3D Ribonuclease Inhibitor 553 720 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1581 Lal-Chr18 17395317 17401694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1581 747 858 WRKY Transcription Factor Family AT4G12020 35.714 7.02e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1581 - - lang:109328521 1296.95