Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1569 ATGATTTATGGTAGGTGTGCAGCTTGCAAAAGTCAAAGAAGGAGGTGCCCTTCAGATTGCATTTTTTCTCCATATTTCCCACCCAATGATCCTCAAAAATTTTATTGTGTTCACAAAATATATGGTGGTAGCAATGTTGGAAAAATACTTCAGCAAATCCCATCCTATGCACGAGAACAAGCTGCAGATACTTTATACTTAGAAGCAAAATGTAGGATTCAAGATCCTATTTATGGGTGTGTTGGAATTATATCTAGGTTGTATCAACAAATTCATGATACAGAAAATGAGCTATCCAAAATTCAAACTCAAATTGTCTTTCACAAGCTTCAAAACACACATGTTGAAGTTGAATCAAACTTTAATATTTTGTCAACAATTGAAGCTGAAACAAACTTGGATTTCTTGTCACCACAAGGCACCATGGGGCAGTTTCAATATTATCATTTAAATCAAGTGCCTAGGTTCTATTAG 474 0.3481 MIYGRCAACKSQRRRCPSDCIFSPYFPPNDPQKFYCVHKIYGGSNVGKILQQIPSYAREQAADTLYLEAKCRIQDPIYGCVGIISRLYQQIHDTENELSKIQTQIVFHKLQNTHVEVESNFNILSTIEAETNLDFLSPQGTMGQFQYYHLNQVPRFY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1569 157 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Lal18g1569 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
Lal18g1569 157 Coils Coil 84 104 - -
Lal18g1569 157 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Lal18g1569 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1569 Lal-Chr18 17331823 17332403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1569 5 115 AS2 family AT3G26620 61.947 4.56e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal18g1569 LOB 1.5e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1569 18 17331823 17332403 Lal6g0073 6 435605 436173 LSH