Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1548 ATGATTTGCACTCTGAAACAACCTAGTACAGCGATCCGAGGTTCTGGTCTTTTTTTCCGGGAAAAGGGTACAACAAATCCCTCACTTCAATCATGTTCCCTTTTTTCAAGAGGAAAAAACCCTCAGAGATCTATGGTTTCAGTGCAAAAGCCACTACACCTTTCTTCTGTTATTGGTGTTAGGAATGTTATTAAGCCTGTGAGATGTGAAAAAAGTGATTTTGTGTGTGGAGCTTATGAGGCAGATAGATCAGAGGTTGAAGGAATCCAGGGCCCATCAGAGGCTGCTAAGAAGGTCAAAATTGGGATATATTTTGCAACATGGTGGGCTTTGAATGTGGTCTTCAATATTTATAATAAGAAGGTGTTGAATGCTTACCCTTATCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGTTCTCTTATGATGTTGATCTCATGGGCCACAAGGATAGCTGAGACACCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGGCATGTAGCTGCAACTGTTAGTATGTCAAAAGTTGCAGTATCATTCACCCATATTATCAAGAGTGGAGAGCCTGCTTTCAGTGTTCTGGTTTCCAGATTTATTTTGGGTGAAACTTTCCCAGTGCCAGTCTATCTGTCTTTAGTTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGCTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGCATGAAGGGAAAGTCAGTCAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCTCTGGTAATTCTCACACCATTTGCAATTGCTGTGGAAGGACCACAGATGTGGGCAGCTGGATATCAAACAGCCCTCTCTCAAATCGGACCGCAATTTTTATGGTGGGTGGTAGCTCAGAGCGTGTCTTACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTTTCTTCCATCATTATCTTCCACACACCTATTCAACCCGTGAATGCTCTTGGAGCTGCTATTGCCGTCTTCGGAACCTTCTTGTATTCTCAGGCAAAACAGTAG 1155 0.4165 MICTLKQPSTAIRGSGLFFREKGTTNPSLQSCSLFSRGKNPQRSMVSVQKPLHLSSVIGVRNVIKPVRCEKSDFVCGAYEADRSEVEGIQGPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAETPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLVILTPFAIAVEGPQMWAAGYQTALSQIGPQFLWWVVAQSVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPIQPVNALGAAIAVFGTFLYSQAKQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1548 384 PANTHER SOLUTE CARRIER FAMILY 35 38 383 - -
Lal18g1548 384 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 100 383 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lal18g1548 384 Pfam Triose-phosphate Transporter family 100 380 IPR004853 -
Lal18g1548 384 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 38 383 - -
Lal18g1548 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1548 Lal-Chr18 17215962 17220464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1548 1 383 Antiporters AT5G54800 73.935 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1548 K15283 - gmx:100801832 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1548 18 17215962 17220464 Lal22g0090 22 558598 563198 ECH
Lal18g1548 18 17215962 17220464 Lal18g1548 18 17215962 17220464 ECH
Lal18g1548 18 17215962 17220464 Lal22g0090 22 558598 563198 LSH
Lal11g1031 11 13905485 13913352 Lal18g1548 18 17215962 17220464 PCT
Lal18g1548 18 17215962 17220464 Lal11g1031 11 13905485 13913352 PCT