Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1536 ATGGAAGAAGAAAACCACCCTCAAACAACAACCCTACCTACATTTCTCAAACAAGACTCTTCTATGCTCCCTCATGCTGTTCACAAGTCTCTCCATCTCCTCCGCCGAAGCCGGAGGCTGTGGCGGAGACACGGTATCAGAGAGCTGATAAAGGAAGAAGAAGTGATGACAGTGAAAGAAGAGAATAATGACAAAGGTTGTGTTGTGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAGAGAATAAGATTAATGCATTGAAGAAGATTGTGCCAAATGGAGAATCACTTGGTATGGACAAGCTTTTTGATGAAACTGCTGGCTATATAATGGCTTTGCAATCTCAAGTTAAAGCATTGAAAACTCTTGCTTCCTTCTTTGAAAACTTGGAGAAAGACAAAACCAAGCTTGGAGGTTGA 420 0.4095 MEEENHPQTTTLPTFLKQDSSMLPHAVHKSLHLLRRSRRLWRRHGIRELIKEEEVMTVKEENNDKGCVVKEEEEEEEEEVENKINALKKIVPNGESLGMDKLFDETAGYIMALQSQVKALKTLASFFENLEKDKTKLGG 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1536 139 CDD bHLH_AtIBH1_like 83 124 IPR044549 GO:0006355
Lal18g1536 139 PANTHER TRANSCRIPTION FACTOR PAR1 33 137 - -
Lal18g1536 139 Coils Coil 69 90 - -
Lal18g1536 139 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 33 137 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1536 Lal-Chr18 17135222 17135641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1536 80 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 38.776 6.88e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1536 - - gmx:100817215 121.709