Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1535 ATGCAGCAGCCAGATCACAGAAAAAAGAGTTCAACGGAGATGGAATTTTTCTCCGAATATGGTGATGCCAACCGATACAAAATTCTAGAAGTCATTGGGAAAGGAAGTTATGGTGTTGTTTGTTCAGCTATTGACACTCACACTGGTGAAAAAGTAGCCATAAAAAAGATTCATGATATCTTTGAACATATATCTGATGCTGCTCGTATTCTCCGTGAAATAAAGTTGCTTAGACTTCTACGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCTCCTTCTAGGAGGGACTTTAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACGAAAGAGCACTATCAGTTTTTTCTATACCAGTTACTTCGAGCACTGAAGTATATTCACACCGCCAATGTCTATCATCGAGACCTGAAGCCAAAGAATATATTGGCCAATGCAAACTGTAAACTTAAAATTTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGCGACACACCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGCGGATCATTTTACTCAAAGTATACACCAGCAATTGATATTTGGAGCATAGGTTGCATCTTTGCTGAAGTTTTAATAGGAAAGCCACTCTTTCCTGGAAAAAATGTTGTCCACCAGTTAGATTTGATGACAGATCTGCTTGGGACTCCCTCACTGGATACTATATCCCGGGTACGCAATGATAAGGCGAGGAGATACCTAACTAGCATGAGGAAGAAGCAGCCTGTACCGTTTGCACAAAAATTTCCTAATGCAGATCCTTTAGCATTACGACTATTGGAAAGGTTGCTTGCATTTGATCCAAAAGACCGGCCTACTGCCGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTCTCAAGAGTTGAGAGGGAACCATCCTGCCAGCCTATTACGAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAGGAAGAAATTCGAGAATTAATTTTCCGTGAGATTCTAGAGTTCCATCCTCAACTACTAAAAGACTATACCAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCCCATCTTGAAGAAAATGGTGGTAAAAGCAGTCTGGTCATGCCACTGGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATCGTACATTCGAATATGGTACCACCAAAACAGCAATCAAATATTGCTTCCACCAAAAACCAACATACAGCTGAAGATTATAATAACAATCCCAGAGATGCAGAAAACCCTGTGGTGAGGTCCATTCATGGAATGCAAAGAGTTCCACTGGCAAAACCTGGTAAAGTTGTTGGCTCAGTTGTTCCATACGAGTATGCGAGTGTTGTCAAGGATTCTTATGATCCTAGGACATTTATAAGAGGTTCTGTTCTTCCTACTCAGCCTATACCCCCGACATATTATTATCAAAGATCTACCTCTGGGAGTCAAGAAAGGCCAGCACCGACCGAAGCTGATAATGGTGTGTCTTTACAAGCAAAGCATGCTCAACAGCAATGTGGTGTCAATGCTAAAATAGTATCAGATATAGCTATCAATATTGATTCCAATCCCTTTTTTATGACAAGGGCAGGAGTGAACAAGATAGAACAAGATGATCGGATAGCGATTGATACAAACTTGCTGCAGCCAAAGGCTCAATATGGTGGGATTAGTGCAGCAGCAGCTGCAGCCACTGCTCATAGAAAAGTGGGACCTGTTCAGTATGGTATGACAACAAGGATGTTCTAG 1860 0.4086 MQQPDHRKKSSTEMEFFSEYGDANRYKILEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLSRVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEFHPQLLKDYTNGTERTNFLYPSAVDQFKKQFAHLEENGGKSSLVMPLERKHVSLPRSTIVHSNMVPPKQQSNIASTKNQHTAEDYNNNPRDAENPVVRSIHGMQRVPLAKPGKVVGSVVPYEYASVVKDSYDPRTFIRGSVLPTQPIPPTYYYQRSTSGSQERPAPTEADNGVSLQAKHAQQQCGVNAKIVSDIAINIDSNPFFMTRAGVNKIEQDDRIAIDTNLLQPKAQYGGISAAAAAATAHRKVGPVQYGMTTRMF 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1535 619 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal18g1535 619 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 495 - -
Lal18g1535 619 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1535 619 CDD STKc_TDY_MAPK 25 362 - -
Lal18g1535 619 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1535 619 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Lal18g1535 619 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Lal18g1535 619 MobiDBLite consensus disorder prediction 427 444 - -
Lal18g1535 619 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 495 - -
Lal18g1535 619 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1535 619 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Lal18g1535 619 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Lal18g1535 619 MobiDBLite consensus disorder prediction 427 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1535 Lal-Chr18 17126740 17132693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1535 1 448 MAP Kinase Gene Family AT2G42880 85.714 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal18g1535 Pkinase 2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1535 - - gmx:100811788 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1535 18 17126740 17132693 Lal22g0097 22 604376 609803 LSH
Lal18g1535 18 17126740 17132693 Lal6g0101 6 616447 624547 LSH
Lal18g1535 18 17126740 17132693 Lal18g1535 18 17126740 17132693 PCT
Lal18g1535 18 17126740 17132693 Lal22g0097 22 604376 609803 PCT
Lal18g1535 18 17126740 17132693 Lal6g0101 6 616447 624547 PCT
Lal22g0097 22 604376 609803 Lal18g1535 18 17126740 17132693 PCT
Lal6g0101 6 616447 624547 Lal18g1535 18 17126740 17132693 PCT