Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1531 ATGTTTGATGAAATGGACCAAAAGCAAGAACAGAACAAGGTGAACCAGAACAATAGGTGTGACAATAATGGCATTGACGATATTACTCTAATTTCTCCACAAGTTCCTAAATCTGTTTCACCAGTTTCTTCTGCAGCTGAGGGTGAAACCTTGCGGCGGCCTCGCGGCCGGCCAGCAGGGTCAAAAAATAAGCCAAAGCCACCAATTATAGTTACAAGGGATAGTGCTAATGCACTCAAGGCTCATGCAATGGAAGTGAGTTCTGGTTGTGATGTGAATGAGAGTTTATTGAACTTTGCAAGGAAGAGACAACGCGGCCTTTGCATACTTAGCAGTACTGGGTGTGTAACAAATGTAACGTTGCGCCAACCGGCCTCAAATGGCGCCATTGTGACCCTTCATGGAAGGTTTGAGATTCTGTCATTGTTGGGATCAATCCTTCCTCCACCAGCACCACCAGGGATCACAGGTCTCACTATTTACTTGGCTGGTGCTCAAGGTCAAGTTGTTGGAGGTGTTGTTGTTGGTGCTTTGATTGCATCTGGTCCTGTTCTTATCATGGTTGCATCATTCATGCATGCTAATTTCGACCGTTTGCCATTGGAAGATGATCATGAACTTGCTGCTGCAATGCATAATCAGGCTCAGCATTACCGCAGCAGCAACAACTATCATGATATCTCTGATTTATATGCAATGCCACACAACCTTCTCACCAATGATGCAATGGCCCCTGAGATATACTCTTGGGCACCACCAAGGAACTTGTCAAAAACCTGA 780 0.4526 MFDEMDQKQEQNKVNQNNRCDNNGIDDITLISPQVPKSVSPVSSAAEGETLRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARKRQRGLCILSSTGCVTNVTLRQPASNGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGVVVGALIASGPVLIMVASFMHANFDRLPLEDDHELAAAMHNQAQHYRSSNNYHDISDLYAMPHNLLTNDAMAPEIYSWAPPRNLSKT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1531 259 Pfam Plants and Prokaryotes Conserved (PCC) domain 81 191 IPR005175 -
Lal18g1531 259 MobiDBLite consensus disorder prediction 11 45 - -
Lal18g1531 259 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 205 - -
Lal18g1531 259 ProSiteProfiles PPC domain profile profile. 76 215 IPR005175 -
Lal18g1531 259 MobiDBLite consensus disorder prediction 1 69 - -
Lal18g1531 259 CDD DUF296 82 162 IPR005175 -
Lal18g1531 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 10 258 - -
Lal18g1531 259 Gene3D - 80 216 - -
Lal18g1531 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 258 IPR014476 GO:0003680
Lal18g1531 259 PIRSF ESCAROLA 2 250 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1531 Lal-Chr18 17105898 17106677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1531 35 252 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 70.183 1.35e-96 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1531 - - gmx:100804941 338.961