Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1530 ATGGAGAATCATGACAATGAATCCTTCTATTACAACAACAACCACCATGAACTCAACCAGTCAAGCTTTCCTTTCTTCAGGGAAGACCACCACTCAACACTTGAAAACTTTCAAGGGTTTGTTGATCCCTCTCATTCCACTTTCACTGACTCATTACATGGTAATTCCATGGATTACAACACTCTTTCAAGAGCCTTTGACTTGTCTTGTAATTCATCATCTGAAGTGATCTCCTCCTCCATTGATGAAAACTCCAAGAAACATAGTAGTGCAGGAGACTTAACAATGATCAGTGAGAACCAATCAACATTGAATTCCTCAGTGTCGTCTTCATCTAATGAAGCAGATCAAGCAGTAACAGAAGAAGAATCAGCAAAAAGCAAGAAAGATAAGCAGCCAAAAGAGTGTGAAGAAGATCATGAAAAGTCTAAGAAAGAGAACAAGCCCAAAAAGAAAGAGAAAAAGGCAAGGGAACCACGCTTTGCCTTCTTGACTAAAAGTGAGGTGGATCATCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCATACCCAAGGAGTTACTATAGATGCACGACTCAGAAGTGCAATGTGAAGAAAAGAGTGGAGAGATCATTTGAAGATCCAAGCACAGTGATCACAACATATGAAGGGCAGCATAATCATCACTGTCCAGCAACATTACGTGGTAATGCTGTCACCATGTTCTCTTCACCTTCCCTTTTTGCTTCCACTTCTATAGGACCAAGCTTCCCCCAAGATTTCCTTGCTCAATTGCTTCCAACTTATCCTAATCATAATCATCATCAGTATCAAAATTCCACGATGTTCCATAACCAAAACCTTTCACATAGTCCTCAGCTGCAACCACAAAATCAACAGCAGCAGCAGCAGCTTCAAATTCCTCGTGACTATGGATTACTGCAAGATCTACTACCTTCATTCCAAGGCAGACAAGAGCCATGA 987 0.4063 MENHDNESFYYNNNHHELNQSSFPFFREDHHSTLENFQGFVDPSHSTFTDSLHGNSMDYNTLSRAFDLSCNSSSEVISSSIDENSKKHSSAGDLTMISENQSTLNSSVSSSSNEADQAVTEEESAKSKKDKQPKECEEDHEKSKKENKPKKKEKKAREPRFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFEDPSTVITTYEGQHNHHCPATLRGNAVTMFSSPSLFASTSIGPSFPQDFLAQLLPTYPNHNHHQYQNSTMFHNQNLSHSPQLQPQNQQQQQQLQIPRDYGLLQDLLPSFQGRQEP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1530 328 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 321 IPR044810 GO:0003700
Lal18g1530 328 ProSiteProfiles WRKY domain profile. 167 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1530 328 SMART WRKY_cls 172 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1530 328 MobiDBLite consensus disorder prediction 119 159 - -
Lal18g1530 328 MobiDBLite consensus disorder prediction 102 118 - -
Lal18g1530 328 MobiDBLite consensus disorder prediction 287 306 - -
Lal18g1530 328 MobiDBLite consensus disorder prediction 102 159 - -
Lal18g1530 328 SUPERFAMILY WRKY DNA-binding domain 165 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g1530 328 Pfam WRKY DNA -binding domain 173 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g1530 328 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 30 321 - -
Lal18g1530 328 Gene3D WRKY domain 156 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1530 Lal-Chr18 17094945 17097067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1530 39 328 WRKY Transcription Factor Family AT4G18170 45.238 4.65e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal18g1530 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1530 - - aprc:113847247 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1530 18 17094945 17097067 Lal22g0103 22 633204 635498 LSH