Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1517 ATGAAAAACTTTCAGAAATTCGGTGTTAGGCATTATAACAAATCTGAACTACCACGCCTTCGATGGAAACCTGAACTCCATCAACATTTCGTTGAAGCTGTTGAAAGTCTAGGTGGAAAACACAAGGCAACTCCAAAACAGATTTTGCAGCAGATGCGTGTGAAAGGACTGAACATTGCTCACATCAAAAGCCACCTTCAGATGTATAGAAATATGCAAGAACATGCCACCCTTGTACCAGTGTATCAGTTGCTGGAAGGAAATACACATGTTCATGATCTACAATTGTGTTCACCCAAAAGATCAACAGGAACTACTTTAAGAGTATCAAAATATGGAAGCAGGATTGTTAAGCAAGAGCTTCATCTGTTAGACAATAGTAAAGGGTTTTCACAAACTAATTATGATCTAAACCAGGAACCCGAGTCAAATGAAGAAGATTGTAGAATGATTAAATTTCATAAATGTTCACTCTCTTTTAGCACGCCTCAAATTTCGATTACACATGGCCAGAGTGGTCGAGAGATAATGCATTTTTCATCATCTGCACCACCTCATAATCATTCTCTTGATTCTAGTTCTATATCATCTATAGGAAACAATTATTTAAACTTAGACCTAAGTATTTGA 630 0.3683 MKNFQKFGVRHYNKSELPRLRWKPELHQHFVEAVESLGGKHKATPKQILQQMRVKGLNIAHIKSHLQMYRNMQEHATLVPVYQLLEGNTHVHDLQLCSPKRSTGTTLRVSKYGSRIVKQELHLLDNSKGFSQTNYDLNQEPESNEEDCRMIKFHKCSLSFSTPQISITHGQSGREIMHFSSSAPPHNHSLDSSSISSIGNNYLNLDLSI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1517 209 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lal18g1517 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Lal18g1517 209 Gene3D - 17 74 - -
Lal18g1517 209 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Lal18g1517 209 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 7 181 - -
Lal18g1517 209 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 18 72 IPR006447 GO:0003677
Lal18g1517 209 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 181 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1517 Lal-Chr18 17010312 17016197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1517 8 70 G2-like Transcription Factor Family AT1G14600 66.667 4.81e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal18g1517 Myb_DNA-binding 8.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1517 - - lang:109341548 221.09