Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1510 ATGATAACTACTATCATCAGTAGAACCCCTTCAATCATTTCAACTCGTCCTTTCATTGCCTTAACCTCCATTTCCACCAAACCCCTTCTCTACCGCTTCGCCGCCGTAACCCCCTCTTCCGGCCACCCTTTACGCTTCTCCGGCCTGTCCGTGTCCAAAGTGCGTGCCTTTCACTCGAATTCAACTCCATTGAATTTCCATGCCTCTTCGGTTTCTAGAGCTGCATATGCTGTAGCTGATTACCCTTTGGAAGAGGCTACCAAAGTGAACAGTGCCGATGAAGGCCTCGAAGTTGCAAAGTTAGGGATTTCTCAGGAGATTGTTTCTGCTTTGTCCAAAAAAGGCATCACCAAACTCTTCCCCATTCAGGGGGCTGTGCTGGAACCTGCTATGCAAGGTCGCGATATGATTGGCCGAGCTAGAACTGGAACGGGGAAAACTCTTGCCTTTGGGATACCCGTCATGGATAAAATCATCAAGTTTAATGCGGAACATGGACGAGGAAAGAATCCTTTGGCGTTGGTTTTGGCTCCAACTAGAGAGCTTGCACGGCAGGTTGAAAAGGAGTTCACTGATGCAGCACCTAACTTGGATACAATTTGTGTTTACGGAGGGACACCTATCTCTCAACAAATGAGGCAGCTTGATTATGGTGTTGATATCGCAGTAGGAACACCTGGTCGAATTATTGACCTTCTCAACAGAGGTGCTCTAAATTTGAAGGAAGTTAAGTTTGCTGTTATTGATGAAGCTGATCAGATGCTTCAAGTGGGCTTCCAGGAAGATGTGGAGAAGATCTTGGCGTGGTTGCCCCCAAATCGTCAGACCCTTATGTTCTCTGCAACAATGCCATCCTGGATAAAGGATATTACACGCAAATACCTAAAAAATCCCCTAACTGTTGATCTCGTGGGAGATTCTGATCAGAAGTTGGCAGATGGAATTTCATTGTACTCAATTGCAACTGATTCTTATGTTAAAGCGGGAACTCTTGGACCACTAGTAAAAGAACATGCAAAAGGAGGAAAGTGTATTGTTTTCACTCAAACCAAACGTGATGCTGATCGGTTATCATACGCCATGGCAAAAAGTCTTCAATGTCAGGCCTTGCATGGAGATATATCACAAGCTCAGAGGGAAAGAACTCTTGCTGGTTTCAGAAATGGCCATTTTAATGTTTTAGTGGCAACTGATGTTGCTTCACGTGGGCTTGATATACCAAATGTTGATCTTGTAATACATTATGATCTTCCAAATTCTTCAGAGATATTTGTTCATCGATCAGGACGAACAGGCCGTGCTGGTAAGAAAGGAGCTGCTATTCTTGTTTATACATCAGATCAAACCAGGGCTGTTAAGACTATTGAGCGTGATGTAGGCTGTAGATTTACAGAGCTACCAAAGATTGCTGTTGCGCCTGGGTCAGTGGACACATTTGGTGGCATGGGTGGTGGGCGATTTAGTTCTCCTGGAGGTTCAAGGGATCGTCGATCTGGTGATTCAGGTTTTGGCCGTAGTTCTGGGTTTGGCCGTACTGGGGGCTACAGTAGCTCTGGATCTGGCCGCTCTAGTTATGGCAATTCTGATGGACCTAGTCGTTTTGGTGCATCTGATGAAACAAATAGATCTGGCGGACAAAGCTCTGGTCGTTATGGCTCCTCTGGTGGCTTTGGATCAGGTCAATCAGGAAGCAGACAATCTGGTGGTTTTGGTAGTTCAGTTCGTTCTGGAGGTTTTGGAGATTTTGGCTCAGGTCTATTCGGTGGTTCCCGTGATGGTGGTGATCGGAACAATAGGGGAAGTCCCTTCTAA 1812 0.4581 MITTIISRTPSIISTRPFIALTSISTKPLLYRFAAVTPSSGHPLRFSGLSVSKVRAFHSNSTPLNFHASSVSRAAYAVADYPLEEATKVNSADEGLEVAKLGISQEIVSALSKKGITKLFPIQGAVLEPAMQGRDMIGRARTGTGKTLAFGIPVMDKIIKFNAEHGRGKNPLALVLAPTRELARQVEKEFTDAAPNLDTICVYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNRGALNLKEVKFAVIDEADQMLQVGFQEDVEKILAWLPPNRQTLMFSATMPSWIKDITRKYLKNPLTVDLVGDSDQKLADGISLYSIATDSYVKAGTLGPLVKEHAKGGKCIVFTQTKRDADRLSYAMAKSLQCQALHGDISQAQRERTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPNSSEIFVHRSGRTGRAGKKGAAILVYTSDQTRAVKTIERDVGCRFTELPKIAVAPGSVDTFGGMGGGRFSSPGGSRDRRSGDSGFGRSSGFGRTGGYSSSGSGRSSYGNSDGPSRFGASDETNRSGGQSSGRYGSSGGFGSGQSGSRQSGGFGSSVRSGGFGDFGSGLFGGSRDGGDRNNRGSPF 603
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1510 603 Gene3D - 97 305 IPR027417 -
Lal18g1510 603 MobiDBLite consensus disorder prediction 480 603 - -
Lal18g1510 603 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 330 474 IPR001650 -
Lal18g1510 603 MobiDBLite consensus disorder prediction 510 573 - -
Lal18g1510 603 CDD DEADc 107 302 - -
Lal18g1510 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 455 IPR027417 -
Lal18g1510 603 SMART ultradead3 115 318 IPR014001 -
Lal18g1510 603 Pfam Helicase conserved C-terminal domain 334 435 IPR001650 -
Lal18g1510 603 Gene3D - 328 474 IPR027417 -
Lal18g1510 603 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 301 IPR014001 -
Lal18g1510 603 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 44 528 - -
Lal18g1510 603 Pfam DEAD/DEAH box helicase 120 289 IPR011545 GO:0003676|GO:0005524
Lal18g1510 603 SMART helicmild6 355 435 IPR001650 -
Lal18g1510 603 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-LIKE 44 528 - -
Lal18g1510 603 CDD SF2_C_DEAD 315 444 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal18g1510 Lal-Chr18 16967267 16971587 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1510 101 467 Eukaryotic Initiation Factors Gene Family AT3G19760 33.962 2.14e-70 231
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1510 - - ahf:112702088 731.48