Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1509 ATGGCTACTTCTGTTTACAGCTTTGTACTCTTCAGCCTCCTCCTTTTGTTGTGTCTAACATGGCATGCTTCTTCTGTTTCTTCACCCCCTTTGTCCTTGAGAAAGCAAGCTTCTATCTTGGTTTCTCTTAAACAAGACTTTGAAGCCAAACCTTCTTCTTTGAATAGGTGGAACATGTCAAACTATATGTCACTTTGCACTTGGCATGGCATTAAGTGTGACAATAACAACATGTCTGTGGTGTCACTAGATATATCCAACTTAAATGTTTCTGGCTCTCTTTCACATTCCATCACAGGACTCAGAAGCCTTGTGAGTCTTTCAATTGCTGGGAATGGCTTTTCTGGTGAGTTCTTAGCTGATATTCACAAGCTACAAGGTTTAAGATACCTCAACATATCAAAGAACATGTTCAGTGGAAGTTTGGGTTTGGAACTCTCACAATTGAAAGAGCTTGAAGTGATAGATGCTTATGACAACATGTTCAATAGCTCCCTCCCTCTTTTTGTCCTTCAACTACCTAAGCTGAAGCACTTGAACTTTGGTGGGAATTACTTCTATGGGGTGATTCCTCCAAGCTATGGTAACATGGTGCAGCTCAATTTTCTGTCTCTTGCAGGAAATGACTTGAGAGGTTACATACCAACTGAGCTTGGAAATCTCACCAACCTGACACATCTTTTCTTGGGATATTACAATGATTTTGATGGTGGGATACCACCTCATTTTGGTAAGTTGATCAATTTAGTTCATCTTGATATTGCTAACTGTGGCATTATAGGTCCAATTCCATCTGAGTTAGGCAACCTCTATAAGTTGGACACACTGTTCTTGCAAACTAATCAGCTTAATGGTTCAATCCCTCCTCAACTAGGCAACTTGAGTAGCTTGAAATCTCTTGATCTATCAAACAATGAGTTAATAGGAGACATACCAAATGAGTTTTCAGGTCTTCATGAGCTCACTCTCTTGAACTTATTCATCAACATGTTCAATGGTGAAATTCCACACTTCATTGCTGAGCTACCTAACTTGGAGGTGTTGAAGCTTTGGCAGAACAACTTCACTGGAGTCATTCCTTCAATGCTTGGCCAGAATGGTAAATTGACTGAGCTTGATCTTTCAACAAATAAGCTCACTGGATCAGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTCAAGATTTTGATTCTTCTCAACAATTTTCTGTTTGGATCTTTGCCTTCGGATCTTGGCCAATGCTACACACTCGAAAGAGTTCGTTTAGGACAGAACTATTTGTCAGGATCAATACCAAATGGTTTTCTTTATTTGCCTGAGCTATCCCTTCTGGAACTACAGAACAATTATCTTAGTGGATGGCTTCCACAAGAAGCAACAGAGACTTCTTCACCCTCTAAACTCACACAATTGAATTTATCAAACAACCATTTATCTGGTCCTCTACCAACCTCAATTGGAAACTTTCCAAGCTTGCAAACTCTTCTTCTTCATGGAAATAGATTTTCAGGAGATATTCCTCCAGATATAGGGAGGTTGAGAAACATTCTAAAGTTGGATTTGAGCACTAACAACTTTTCATGCAGTATTCCTCCTGAGATAGGCAACTGTGTCTTACTCACATATTTAGATTTGAGCCAAAACCAACTTTCAGGCCCTATACCAATTAAGGTTTCTCAAATTCACATACTAAACTATCTTAATGTCTCATGGAACCACCTAAACCAAAGTATTCTCAAGGAACTTGGGGCAATGAAGGGCTTAACTTCAGCAGATTTTTCTCACAACAACTTCTCTGGTTCAGTACCTAATGTAGGACAATTCTCAGTCTTTAACTCAACATCATTTGAAGGTAATCCTCAACTATGTGGATATGACTTGAATCCATGCAACCATTCTTCAAATGCAGTATTGGAATCTCATAACAAAAGCAGTGCAAAACCTGGAGTTCCTGGCAAATATAAACTTCTTTTGGCATTGGCACTGTTATGTTGTTCATTGGTGTTTGCAACATTAGCCATTATGAGGAGCAGGAATGCAAGGAGGAACTCCAATTCATGGACGCTCACAACATTTCAGAAGCTGGAATATGGAAGTATAGACATCTTAAGTTGCATAAAGGAAAACAATCTGATAGGAAGAGGAGGAGCTGGGGTTGTATATGGAGGAACCATGCCAAATGGAGAACAAGTAGCTGTGAAAAAATTGTTAGGAATTAACAAAGGTTGTTCTCATGATAATGGCCTCTCTGCAGAAATAAAGACACTTGGTAGAATCAGGCACAGGTACATTGTGAAGTTGCTAGCTTTTTGTTCAAATAGAGAGACCAATTTACTTGTTTATGAGTACATGCCAAATGGAAGCTTAGGTGAAGCCTTGCATGGAAAAAAAGGTGAATTTCTCAAATGGGATACTAGGCTGAAAATAGCTACAGAAGCTGCAAAAGGGCTTTGTTATTTGCACCATGATTGTTCTCCTCTCATAATCCATAGAGATGTCAAATCAAACAACATACTATTGAACTCTGACTTTGAGGCTCATGTTGCTGATTTTGGCCTTGCCAAGTTCTTGCAAGATACTGGGACATCACAGTGCATGTCTTCTATTGCAGGTTCTTATGGCTATATAGCTCCAGAATATGCATACACATTGAAAATTGATGAGAAGAGTGATGTTTATAGCTTTGGAGTGGTGTTGCTAGAACTGTTAACAGGGCTAAGGGCAGTGGGAGATTTTGGGGAAGAAGGAGTAGACATTGTTCAATGGACCAAAATTCAAACAAAGTGGTGCAAAGAGAGAGTTGTTAAGATCCTTGATGGGAGATTACATCATATTCCTTTTGATGAAGCAATGCAATTGTTCTTTGTAGCCATGTTATGTGTTCAAGAACAAAGTGTGGAGCGACCAACCATGAGGGAAGTTGTTCAAATGCTTGCACAAGCAAAACAACCAAATACATTTCAAATGCAGTGA 2973 0.3932 MATSVYSFVLFSLLLLLCLTWHASSVSSPPLSLRKQASILVSLKQDFEAKPSSLNRWNMSNYMSLCTWHGIKCDNNNMSVVSLDISNLNVSGSLSHSITGLRSLVSLSIAGNGFSGEFLADIHKLQGLRYLNISKNMFSGSLGLELSQLKELEVIDAYDNMFNSSLPLFVLQLPKLKHLNFGGNYFYGVIPPSYGNMVQLNFLSLAGNDLRGYIPTELGNLTNLTHLFLGYYNDFDGGIPPHFGKLINLVHLDIANCGIIGPIPSELGNLYKLDTLFLQTNQLNGSIPPQLGNLSSLKSLDLSNNELIGDIPNEFSGLHELTLLNLFINMFNGEIPHFIAELPNLEVLKLWQNNFTGVIPSMLGQNGKLTELDLSTNKLTGSVPKSLCLGKRLKILILLNNFLFGSLPSDLGQCYTLERVRLGQNYLSGSIPNGFLYLPELSLLELQNNYLSGWLPQEATETSSPSKLTQLNLSNNHLSGPLPTSIGNFPSLQTLLLHGNRFSGDIPPDIGRLRNILKLDLSTNNFSCSIPPEIGNCVLLTYLDLSQNQLSGPIPIKVSQIHILNYLNVSWNHLNQSILKELGAMKGLTSADFSHNNFSGSVPNVGQFSVFNSTSFEGNPQLCGYDLNPCNHSSNAVLESHNKSSAKPGVPGKYKLLLALALLCCSLVFATLAIMRSRNARRNSNSWTLTTFQKLEYGSIDILSCIKENNLIGRGGAGVVYGGTMPNGEQVAVKKLLGINKGCSHDNGLSAEIKTLGRIRHRYIVKLLAFCSNRETNLLVYEYMPNGSLGEALHGKKGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFLQDTGTSQCMSSIAGSYGYIAPEYAYTLKIDEKSDVYSFGVVLLELLTGLRAVGDFGEEGVDIVQWTKIQTKWCKERVVKILDGRLHHIPFDEAMQLFFVAMLCVQEQSVERPTMREVVQMLAQAKQPNTFQMQ 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1509 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 7 987 - -
Lal18g1509 990 Gene3D Ribonuclease Inhibitor 340 637 IPR032675 -
Lal18g1509 990 Gene3D Ribonuclease Inhibitor 236 338 IPR032675 -
Lal18g1509 990 ProSiteProfiles Leucine-rich repeat profile. 296 318 IPR001611 GO:0005515
Lal18g1509 990 Gene3D Transferase(Phosphotransferase) domain 1 784 990 - -
Lal18g1509 990 SMART LRR_typ_2 367 390 IPR003591 -
Lal18g1509 990 SMART LRR_typ_2 489 513 IPR003591 -
Lal18g1509 990 SMART LRR_typ_2 294 317 IPR003591 -
Lal18g1509 990 SMART LRR_typ_2 197 221 IPR003591 -
Lal18g1509 990 SMART LRR_typ_2 438 462 IPR003591 -
Lal18g1509 990 SMART LRR_typ_2 270 293 IPR003591 -
Lal18g1509 990 SMART LRR_typ_2 342 365 IPR003591 -
Lal18g1509 990 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Lal18g1509 990 Gene3D Phosphorylase Kinase; domain 1 672 783 - -
Lal18g1509 990 PANTHER UNNAMED PRODUCT 7 987 - -
Lal18g1509 990 SUPERFAMILY Protein kinase-like (PK-like) 701 978 IPR011009 -
Lal18g1509 990 Pfam Leucine rich repeat 272 329 IPR001611 GO:0005515
Lal18g1509 990 SUPERFAMILY L domain-like 367 630 - -
Lal18g1509 990 ProSiteProfiles Protein kinase domain profile. 706 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1509 990 SUPERFAMILY RNI-like 82 428 - -
Lal18g1509 990 Gene3D Ribonuclease Inhibitor 35 143 IPR032675 -
Lal18g1509 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Lal18g1509 990 SMART serkin_6 706 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1509 990 Pfam Protein kinase domain 708 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1509 990 Gene3D Ribonuclease Inhibitor 144 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1509 Lal-Chr18 16959802 16964185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1509 22 980 Receptor kinase-like Gene Family AT5G65700 57.484 0.0 1077
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal18g1509 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1509 - - gmx:100816158 1599.72